RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ZNF8P17098 575 aaPredicted RBP17.25■□□□□ 0.35
SMG6-214ENST00000573827 ETV5P41161 510 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 CLN3Q13286 438 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 CLPPQ16740 277 aaPredicted RBP17.25■□□□□ 0.35
SMG6-214ENST00000573827 KHDC1Q4VXA5 237 aaKnown RBP17.25■□□□□ 0.35
SMG6-214ENST00000573827 ZNF648Q5T619 568 aaPredicted RBP17.25■□□□□ 0.35
SMG6-214ENST00000573827 ZC3H18Q86VM9 953 aaKnown RBP17.25■□□□□ 0.35
SMG6-214ENST00000573827 TRAM1L1Q8N609 369 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 ALG3Q92685 438 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 P3H4Q92791 437 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 FCRL5Q96RD9 977 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 HEMGNQ9BXL5 484 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 STRADBQ9C0K7 418 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 RMI1Q9H9A7 625 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 ARFGAP3Q9NP61 516 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 FAM153AQ9UHL3 310 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 LOXL2Q9Y4K0 774 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 PCDHA3Q9Y5H8 950 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 IGHV1OR21-1A0A087WYE8 117 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 APOC4-APOC2K7ER74 178 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 CHUKO15111 745 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 MTSS1O43312 755 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 ASMTLO95671 621 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 APOC2P02655 101 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 SLC5A2P31639 672 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 PTPN7P35236 360 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 CHRNA4P43681 627 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 AMZ1Q400G9 498 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 ODF2Q5BJF6 829 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 ALS2CLQ60I27 953 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 PDPK2PQ6A1A2 396 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 FOXR1Q6PIV2 292 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 USP53Q70EK8 1073 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 ADGRG6Q86SQ4 1221 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 DAAM2Q86T65 1068 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 ACRBPQ8NEB7 543 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 HTR3CQ8WXA8 447 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 RBM41Q96IZ5 413 aaKnown RBP17.24■□□□□ 0.35
SMG6-214ENST00000573827 VAT1Q99536 393 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 ZSCAN5AQ9BUG6 496 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 CARD9Q9H257 536 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 C10orf88Q9H8K7 445 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 CPNE5Q9HCH3 593 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 PDP2Q9P2J9 529 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 ZNHIT2Q9UHR6 403 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 EFR3BQ9Y2G0 817 aa17.24■□□□□ 0.35
SMG6-214ENST00000573827 IGHV5-10-1A0A0J9YXX1 117 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 GRID2IPA4D2P6 1211 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 RHPN2P1A8MT19 583 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 HACD1B0YJ81 288 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 NVLO15381 856 aaKnown RBP17.23■□□□□ 0.35
SMG6-214ENST00000573827 KLK10O43240 276 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 ITIH1P19827 911 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 CTNNA2P26232 953 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 ALDH4A1P30038 563 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 CA5AP35218 305 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 HMGCLP35914 325 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 ARSDP51689 593 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 CLCNKAP51800 687 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 COPS2P61201 443 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 XRCC4Q13426 336 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 PEX6Q13608 980 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 SIRPB2Q5JXA9 342 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 ZNF569Q5MCW4 686 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 NKAIN2Q5VXU1 208 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 IYDQ6PHW0 289 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 CHST15Q7LFX5 561 aaPredicted RBP17.23■□□□□ 0.35
SMG6-214ENST00000573827 GPR155Q7Z3F1 870 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 ZNF547Q8IVP9 402 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 GLYATL1Q969I3 302 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 TMEM159Q96B96 161 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 UBL7Q96S82 380 aaPredicted RBP17.23■□□□□ 0.35
SMG6-214ENST00000573827 SPATA16Q9BXB7 569 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 OR2AG1Q9H205 316 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 TRIM39Q9HCM9 518 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 SLC23A2Q9UGH3 650 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 KCNK6Q9Y257 313 aa17.23■□□□□ 0.35
SMG6-214ENST00000573827 A0A0U1RQJ8 604 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 C9orf172C9J069 976 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 GAPDHSO14556 408 aaPredicted RBP17.22■□□□□ 0.35
SMG6-214ENST00000573827 EFSO43281 561 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 GRID2O43424 1007 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 ACP5P13686 325 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 RBL1P28749 1068 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 LIMK2P53671 638 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 AADACL2Q6P093 401 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 PIM3Q86V86 326 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 ACTL9Q8TC94 416 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 DTX3LQ8TDB6 740 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 CALR3Q96L12 384 aaKnown RBP17.22■□□□□ 0.35
SMG6-214ENST00000573827 PLEKHG4BQ96PX9 1271 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 GPR63Q9BZJ6 419 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 SARS2Q9NP81 518 aaKnown RBP17.22■□□□□ 0.35
SMG6-214ENST00000573827 IL26Q9NPH9 171 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 RAD18Q9NS91 495 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 IL17CQ9P0M4 197 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 TMEM9Q9P0T7 183 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 KLHL8Q9P2G9 620 aaPredicted RBP17.22■□□□□ 0.35
SMG6-214ENST00000573827 PISDQ9UG56 409 aa17.22■□□□□ 0.35
SMG6-214ENST00000573827 TRBV23OR9-2A0A075B6M9 112 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms