RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 IPMKQ8NFU5 416 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 CCDC97Q96F63 343 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 QKIQ96PU8 341 aaKnown RBP eCLIP12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 CMKLR1Q99788 373 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 HERPUD2Q9BSE4 406 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 ZSCAN5AQ9BUG6 496 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 OR2AG1Q9H205 316 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 PRORYQ9H606 182 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 C10orf88Q9H8K7 445 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 RMI1Q9H9A7 625 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 CPNE5Q9HCH3 593 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 KCNK4Q9NYG8 393 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 ATXN10Q9UBB4 475 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 RSPH14Q9UHP6 348 aa12.58□□□□□ -0.4
NPLOC4-213ENST00000573519 GOLGA6L6A8MZA4 724 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 HACD1B0YJ81 288 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 APOC4-APOC2K7ER74 178 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 GRID2O43424 1007 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 EML2O95834 649 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 APOC2P02655 101 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 PTMAP06454 111 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 ZNF8P17098 575 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 BPIP17213 487 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 RBL1P28749 1068 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 SLC5A2P31639 672 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 MLLT3P42568 568 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 CHRNA4P43681 627 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 MAPK10P53779 464 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 DCDC1P59894 354 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 ZFP36L1Q07352 338 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 PLA2G4EQ3MJ16 856 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 SOWAHCQ53LP3 525 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 SIRPB2Q5JXA9 342 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 AADACL2Q6P093 401 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 CRTC3Q6UUV7 619 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 KDELC1Q6UW63 502 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 GPR155Q7Z3F1 870 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 ZNF438Q7Z4V0 828 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 PHYKPLQ8IUZ5 450 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 LRRC57Q8N9N7 239 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 RCBTB1Q8NDN9 531 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 GDAP1Q8TB36 358 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 SLC37A2Q8TED4 501 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 ALG3Q92685 438 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 AHCYL2Q96HN2 611 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 CALR3Q96L12 384 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 FCRL5Q96RD9 977 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 SRPK1Q96SB4 655 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 VAT1Q99536 393 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 SLC38A3Q99624 504 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 FERMT1Q9BQL6 677 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 NUDT22Q9BRQ3 303 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 FSD1LQ9BXM9 530 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 DPH1Q9BZG8 443 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 CARD9Q9H257 536 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 OSGEPL1Q9H4B0 414 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 STN1Q9H668 368 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 AKAP7Q9P0M2 348 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 TBC1D29Q9UFV1 150 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 PCDHA3Q9Y5H8 950 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 APC2O95996 2303 aa12.57□□□□□ -0.4
NPLOC4-213ENST00000573519 CCDC66A2RUB6 948 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 NUAK1O60285 661 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 MTX2O75431 263 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 FTCDO95954 541 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 MPSTP25325 297 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 CD1CP29017 333 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 CETN2P41208 172 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 MAPK9P45984 424 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 GPR3P46089 330 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 UCNP55089 124 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 RWDD2BP57060 319 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 COPS2P61201 443 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 OTUD4Q01804 1114 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 HHEXQ03014 270 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 KIF5AQ12840 1032 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 XRCC4Q13426 336 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 NFATC2Q13469 925 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 NR1D2Q14995 579 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 INSCQ1MX18 579 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 ARHGAP40Q5TG30 622 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 ADGRG6Q86SQ4 1221 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 CLEC14AQ86T13 490 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 SLITRK4Q8IW52 837 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 SFRP1Q8N474 314 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 BLOC1S5Q8TDH9 187 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 GLYATL1Q969I3 302 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 TMEM159Q96B96 161 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 OXNAD1Q96HP4 312 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 MRGPRX2Q96LB1 330 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 CCDC74BQ96LY2 380 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 UBL7Q96S82 380 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 FAM118BQ9BPY3 351 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 OSBPL8Q9BZF1 889 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 TRIM39Q9HCM9 518 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 KLC4Q9NSK0 619 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 TRHDEQ9UKU6 1024 aa12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 PACSIN2Q9UNF0 486 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-213ENST00000573519 IGHV1OR21-1A0A087WYE8 117 aa12.55□□□□□ -0.4
NPLOC4-213ENST00000573519 LOC285095A0A1B0GVY8 99 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms