RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 WNT3AP56704 352 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 SQSTM1Q13501 440 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 LRP8Q14114 963 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 AADACL2Q6P093 401 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 RAB11FIP2Q7L804 512 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 ADGRG6Q86SQ4 1221 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 ZC3H18Q86VM9 953 aaKnown RBP17.14■□□□□ 0.33
SMG6-212ENST00000573153 TRAM1L1Q8N609 369 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 SLC37A2Q8TED4 501 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 SNRNP27Q8WVK2 155 aaKnown RBP17.14■□□□□ 0.33
SMG6-212ENST00000573153 HTR3CQ8WXA8 447 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 NAF1Q96HR8 494 aaKnown RBP17.14■□□□□ 0.33
SMG6-212ENST00000573153 RDH14Q9HBH5 336 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 EPB41L5Q9HCM4 733 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 ATXN10Q9UBB4 475 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 TBC1D29Q9UFV1 150 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 PCDHGA7Q9Y5G6 932 aa17.14■□□□□ 0.33
SMG6-212ENST00000573153 IGHV1OR21-1A0A087WYE8 117 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 CHUKO15111 745 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 PMPCBO75439 489 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 ZNF8P17098 575 aaPredicted RBP17.13■□□□□ 0.33
SMG6-212ENST00000573153 ITIH1P19827 911 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 RWDD2BP57060 319 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 CLN3Q13286 438 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 EIF3IQ13347 325 aaKnown RBP17.13■□□□□ 0.33
SMG6-212ENST00000573153 MSLNQ13421 630 aaPredicted RBP17.13■□□□□ 0.33
SMG6-212ENST00000573153 PEX6Q13608 980 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 LRRC69Q6ZNQ3 347 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 GALNT13Q8IUC8 556 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 ZNF547Q8IVP9 402 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 KLHDC8BQ8IXV7 354 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 TMEM74Q96NL1 305 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 OSBPL8Q9BZF1 889 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 CARD9Q9H257 536 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 ARFGAP3Q9NP61 516 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 RAD18Q9NS91 495 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 TMEM9Q9P0T7 183 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 FAM153AQ9UHL3 310 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 TRHDEQ9UKU6 1024 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 LOXL2Q9Y4K0 774 aa17.13■□□□□ 0.33
SMG6-212ENST00000573153 ZNF106Q9H2Y7 1883 aaKnown RBP17.13■□□□□ 0.33
SMG6-212ENST00000573153 ATMQ13315 3056 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 IGHV5-10-1A0A0J9YXX1 117 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 F5H423 210 aaPredicted RBP17.12■□□□□ 0.33
SMG6-212ENST00000573153 EFSO43281 561 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 RBL1P28749 1068 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 SIRPB2Q5JXA9 342 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 ALS2CLQ60I27 953 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 PDPK2PQ6A1A2 396 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 C11orf96Q7Z7L8 435 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 KIAA1328Q86T90 577 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 FBXO39Q8N4B4 442 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 KCNE4Q8WWG9 221 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 FCRL3Q96P31 734 aaPredicted RBP17.12■□□□□ 0.33
SMG6-212ENST00000573153 RMI1Q9H9A7 625 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 PDP2Q9P2J9 529 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 TRIM10Q9UDY6 481 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 SLC23A2Q9UGH3 650 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 KCNK6Q9Y257 313 aa17.12■□□□□ 0.33
SMG6-212ENST00000573153 MIF4GDA9UHW6 222 aaKnown RBP17.11■□□□□ 0.33
SMG6-212ENST00000573153 GPR39O43194 453 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 ZNF189O75820 626 aaPredicted RBP17.11■□□□□ 0.33
SMG6-212ENST00000573153 CPNE6O95741 557 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 RBMS1P29558 406 aaKnown RBP17.11■□□□□ 0.33
SMG6-212ENST00000573153 SLC5A2P31639 672 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 HMGCLP35914 325 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 GPR3P46089 330 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 CLCNKAP51800 687 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 NAP1L1P55209 391 aaKnown RBP17.11■□□□□ 0.33
SMG6-212ENST00000573153 KIF5AQ12840 1032 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 CLPPQ16740 277 aaPredicted RBP17.11■□□□□ 0.33
SMG6-212ENST00000573153 NKAIN2Q5VXU1 208 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 ZNF761Q86XN6 746 aaPredicted RBP17.11■□□□□ 0.33
SMG6-212ENST00000573153 SYCE1Q8N0S2 351 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 ACTL9Q8TC94 416 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 DTX3LQ8TDB6 740 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 UBE2Q2Q8WVN8 375 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 GLYATL1Q969I3 302 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 PMEPA1Q969W9 287 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 ZSCAN5AQ9BUG6 496 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 DPH1Q9BZG8 443 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 TRABDQ9H4I3 376 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 CPNE5Q9HCH3 593 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 FOXJ2Q9P0K8 574 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 IL17CQ9P0M4 197 aa17.11■□□□□ 0.33
SMG6-212ENST00000573153 SCHIP1Q9P0W5 487 aaPredicted RBP17.11■□□□□ 0.33
SMG6-212ENST00000573153 KLHL8Q9P2G9 620 aaPredicted RBP17.11■□□□□ 0.33
SMG6-212ENST00000573153 AHCTF1Q8WYP5 2266 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 C9orf172C9J069 976 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 TMX2-CTNND1H3BSU7 103 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 MTX2O75431 263 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 C1QL1O75973 258 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 ASMTLO95671 621 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 SLC4A1P02730 911 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 THRAP10827 490 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 PYGMP11217 842 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 ACP5P13686 325 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 ADRA1AP35348 466 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 CETN2P41208 172 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms