RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ACLYP53396 1101 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 NR1H2P55055 460 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 NKX3-2P78367 333 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 PLOD1Q02809 727 aaPredicted RBP11.15□□□□□ -0.63
RPAIN-212ENST00000573126 MRPL58Q14197 206 aaKnown RBP11.15□□□□□ -0.63
RPAIN-212ENST00000573126 BTG3Q14201 252 aaPredicted RBP11.15□□□□□ -0.63
RPAIN-212ENST00000573126 USP41Q3LFD5 358 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 HABP4Q5JVS0 413 aaKnown RBP11.15□□□□□ -0.63
RPAIN-212ENST00000573126 BLOC1S3Q6QNY0 202 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 AFTPHQ6ULP2 937 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 SYVN1Q86TM6 617 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 FAM47BQ8NA70 645 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 PCSK9Q8NBP7 692 aaKnown RBP11.15□□□□□ -0.63
RPAIN-212ENST00000573126 DUS3LQ96G46 650 aaKnown RBP11.15□□□□□ -0.63
RPAIN-212ENST00000573126 CDK15Q96Q40 435 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 HBEGFQ99075 208 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 CCT7Q99832 543 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 NMRK2Q9NPI5 230 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 OLAHQ9NV23 265 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 DUS2Q9NX74 493 aaKnown RBP11.15□□□□□ -0.63
RPAIN-212ENST00000573126 PTTG2Q9NZH5 202 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 SLAMF8Q9P0V8 285 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 FKBPLQ9UIM3 349 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 IQCF5A8MTL0 148 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 ARPC2O15144 300 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 INSIG1O15503 277 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 ACSL4O60488 711 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 H6PDO95479 791 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 CYBBP04839 570 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 NCK1P16333 377 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 PCSK6P29122 969 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 OXCT1P55809 520 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 ATP6V0D1P61421 351 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 GPR17Q13304 367 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 NFYCQ13952 458 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 RBBP7Q16576 425 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 NHSL2Q5HYW2 709 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 ALG1LQ6GMV1 187 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 PRSS55Q6UWB4 352 aaPredicted RBP11.14□□□□□ -0.63
RPAIN-212ENST00000573126 LINGO4Q6UY18 593 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 EPHX4Q8IUS5 362 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 MINDY1Q8N5J2 469 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 TRIML2Q8N7C3 387 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 EEF1AKMT1Q8WVE0 214 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 TMIGD2Q96BF3 282 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 HIC2Q96JB3 615 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 TDRD1Q9BXT4 1180 aaKnown RBP11.14□□□□□ -0.63
RPAIN-212ENST00000573126 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.14□□□□□ -0.63
RPAIN-212ENST00000573126 MAGEH1Q9H213 219 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 PIF1Q9H611 641 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 CCM2LQ9NUG4 571 aaPredicted RBP11.14□□□□□ -0.63
RPAIN-212ENST00000573126 ARMC1Q9NVT9 282 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 DMTF1Q9Y222 760 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 GPR45Q9Y5Y3 372 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 PLXNA3P51805 1871 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 TMEM88BA6NKF7 163 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 C2orf81A6NN90 581 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 H0YJX3 145 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 TSPAN3O60637 253 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 MATN4O95460 622 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 MT-ND1P03886 318 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 RPS17P08708 135 aaKnown RBP11.14□□□□□ -0.63
RPAIN-212ENST00000573126 BMP2P12643 396 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 PSMA4P25789 261 aaKnown RBP11.14□□□□□ -0.63
RPAIN-212ENST00000573126 CDH15P55291 814 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 UFM1P61960 85 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 FAM189BP81408 668 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 ZRANB3Q5FWF4 1079 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 PAGE3Q5JUK9 113 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 B3GNT6Q6ZMB0 384 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 C16orf59Q7L2K0 433 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 TAS1R1Q7RTX1 841 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 OR2T11Q8NH01 316 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 TMEM74Q96NL1 305 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 ZNF599Q96NL3 588 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 TCF12Q99081 682 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 HGH1Q9BTY7 390 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 SCUBE2Q9NQ36 999 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 SLC52A3Q9NQ40 469 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 GID8Q9NWU2 228 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 MARCH5Q9NX47 278 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 EIF2B4Q9UI10 523 aaKnown RBP11.14□□□□□ -0.63
RPAIN-212ENST00000573126 V9GYQ6 96 aa11.14□□□□□ -0.63
RPAIN-212ENST00000573126 ASPDHA6ND91 283 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 SYCE1LA8MT33 242 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 H3BNC9 293 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 INPP4BO15327 924 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 TSPAN12O95859 305 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 SLC10A3P09131 477 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 ZDHHC11BP0C7U3 371 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 HSD17B1P14061 328 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 RPL17P18621 184 aaKnown RBP11.13□□□□□ -0.63
RPAIN-212ENST00000573126 MC4RP32245 332 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 ATP5C1P36542 298 aaKnown RBP11.13□□□□□ -0.63
RPAIN-212ENST00000573126 HK3P52790 923 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 KCNK10P57789 538 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CREB5Q02930 508 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 TAF1AQ15573 450 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-212ENST00000573126 CYP51A1Q16850 503 aa11.13□□□□□ -0.63
RPAIN-212ENST00000573126 TIGD2Q4W5G0 525 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms