RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CHKBQ9Y259 395 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 TTLL3Q9Y4R7 772 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 PCDHGB7Q9Y5F8 929 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 PCDHA13Q9Y5I0 950 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 EPN1Q9Y6I3 576 aaPredicted RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 DGKBQ9Y6T7 804 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 USP24Q9UPU5 2620 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 KNTC1P50748 2209 aa7.42□□□□□ -1.22
NUP88-205ENST00000572809 GOLGA4Q13439 2230 aaKnown RBP7.42□□□□□ -1.22
NUP88-205ENST00000572809 CACNA1BQ00975 2339 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 SHROOM3Q8TF72 1996 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 A0A0U1RQS6 177 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 GOLGA6CA6NDK9 693 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 GOLGA6BA6NDN3 693 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 ANKRD66B4E2M5 251 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 ZRANB2O95218 330 aaKnown RBP eCLIP7.41□□□□□ -1.22
NUP88-205ENST00000572809 PRLP01236 227 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 HLA-DQB2P05538 268 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 H2AFB1P0C5Y9 115 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 H2AFB2P0C5Z0 115 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 GOLGA6DP0CG33 693 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 MYCLP1P12525 358 aaPredicted RBP7.41□□□□□ -1.22
NUP88-205ENST00000572809 ACPPP15309 386 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 ZNF30P17039 623 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 TGM2P21980 687 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 LHCGRP22888 699 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 CD86P42081 329 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 GPR1P46091 355 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 NR2C2P49116 596 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 RPL26P61254 145 aaKnown RBP7.41□□□□□ -1.22
NUP88-205ENST00000572809 DYNLT1P63172 113 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 IFI35P80217 286 aaPredicted RBP7.41□□□□□ -1.22
NUP88-205ENST00000572809 DPTQ07507 201 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 TFDP2Q14188 446 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 TCEA2Q15560 299 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 PERM1Q5SV97 790 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 KCTD16Q68DU8 428 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 OGFOD3Q6PK18 319 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 MFSD7Q6UXD7 560 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 NPNTQ6UXI9 565 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 TAF8Q7Z7C8 310 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 TMTC1Q8IUR5 882 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 SLC35F3Q8IY50 421 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 RCOR2Q8IZ40 523 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 CNTD1Q8N815 330 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 FAM46DQ8NEK8 389 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 OR1E3Q8WZA6 343 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 NAT6Q93015 286 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 NXPE2Q96DL1 559 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 DTD2Q96FN9 168 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 PDXPQ96GD0 296 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 MRFAP1L1Q96HT8 127 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 DEPDC7Q96QD5 511 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 SMIM14Q96QK8 99 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 PANX2Q96RD6 677 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 RBM15Q96T37 977 aaKnown RBP eCLIP7.41□□□□□ -1.22
NUP88-205ENST00000572809 MLPHQ9BV36 600 aaPredicted RBP7.41□□□□□ -1.22
NUP88-205ENST00000572809 TDRD1Q9BXT4 1180 aaKnown RBP7.41□□□□□ -1.22
NUP88-205ENST00000572809 TEX101Q9BY14 249 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 BRD8Q9H0E9 1235 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 TMEM168Q9H0V1 697 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 ABCG8Q9H221 673 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 RASSF4Q9H2L5 321 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 FGF22Q9HCT0 170 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 GOLGA6AQ9NYA3 693 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 SIRPGQ9P1W8 387 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 CD84Q9UIB8 345 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 DNPEPQ9ULA0 475 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 RPL26L1Q9UNX3 145 aaKnown RBP7.41□□□□□ -1.22
NUP88-205ENST00000572809 GPR34Q9UPC5 381 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 RAXQ9Y2V3 346 aa7.41□□□□□ -1.22
NUP88-205ENST00000572809 IGF2RP11717 2491 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 A0A0A6YYK5 440 aaPredicted RBP7.4□□□□□ -1.22
NUP88-205ENST00000572809 PRSS38A1L453 326 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 PPP1R12AO14974 1030 aaPredicted RBP7.4□□□□□ -1.22
NUP88-205ENST00000572809 PSTPIP1O43586 416 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 CST8O60676 142 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 USP12O75317 370 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 CSO75390 466 aaKnown RBP7.4□□□□□ -1.22
NUP88-205ENST00000572809 NDUFA10O95299 355 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 CLDN7O95471 211 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 FUCA1P04066 466 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 CEACAM5P06731 702 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 PYGLP06737 847 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 MMP2P08253 660 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 TEAD1P28347 426 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 CDKN2BP42772 138 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 CDK3Q00526 305 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 ZBTB17Q13105 803 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 LLGL1Q15334 1064 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 ISXQ2M1V0 245 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 SPRED3Q2MJR0 410 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 TEX44Q53QW1 395 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 FAM182AQ5T1J6 154 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 KAZNQ674X7 775 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 LRRC66Q68CR7 880 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 RAET1GQ6H3X3 334 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 C19orf48Q6RUI8 117 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 SPOCD1Q6ZMY3 1216 aa7.4□□□□□ -1.22
NUP88-205ENST00000572809 RFLNAQ6ZTI6 216 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms