RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MBNL1Q9NR56 388 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 NRBP2Q9NSY0 501 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GIMAP4Q9NUV9 329 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 SETD4Q9NVD3 440 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TBC1D13Q9NVG8 400 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TAS2R14Q9NYV8 317 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PLA2G3Q9NZ20 509 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 SMARCAL1Q9NZC9 954 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 IL37Q9NZH6 218 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 IGSF9Q9P2J2 1179 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ANKMY1Q9P2S6 941 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 COPG2Q9UBF2 871 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 SPASTQ9UBP0 616 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 APEX2Q9UBZ4 518 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 DPP7Q9UHL4 492 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CYTH4Q9UIA0 394 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 LEF1Q9UJU2 399 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 INTS6Q9UL03 887 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 RAB21Q9UL25 225 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TMPRSS11EQ9UL52 423 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TTC7AQ9ULT0 858 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 NENFQ9UMX5 172 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 HIF3AQ9Y2N7 669 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 MRPS2Q9Y399 296 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 PCDHA13Q9Y5I0 950 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 MTCL1Q9Y4B5 1905 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 PLXNA3P51805 1871 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 NYNRINQ9P2P1 1898 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 LTBP2Q14767 1821 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 SRCAPQ6ZRS2 3230 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CENPFP49454 3210 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 A0A075B6Q4 140 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 A0A1W2PPW3 197 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SSU72P8A0A1W2PR75 194 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CCDC162PA2VCL2 907 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 GOLGA8OA6NCC3 632 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SLC22A31A6NKX4 558 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 OR6C76A6NM76 312 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 AHRRA9YTQ3 701 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 GOLGA8NF8WBI6 632 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 WRBO00258 174 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 MAP2K7O14733 419 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 TNPO2O14787 897 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 PIP5K1BO14986 540 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 ZNF185O15231 689 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RAD51BO15315 384 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RRP8O43159 456 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 PJA2O43164 708 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CYP26A1O43174 497 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 ASNA1O43681 348 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 FKTNO75072 461 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 TRIM3O75382 744 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 ZNF821O75541 412 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 GCATO75600 419 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 KRT36O76013 467 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RECQL5O94762 991 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 MYO1DO94832 1006 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SPDEFO95238 335 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 KCNK5O95279 499 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 AK1P00568 194 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PDGFBP01127 241 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 C4BPAP04003 597 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 KRT8P05787 483 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 MMP2P08253 660 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CLTAP09496 248 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CNPP09543 421 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 HOXC6P09630 235 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PABPC4LP0CB38 370 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 ZCCHC18P0CG32 403 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SMIM10L2AP0DMW4 78 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SMIM10L2BP0DMW5 78 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CXCL8P10145 99 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 THRBP10828 461 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 ODC1P11926 461 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 BMP1P13497 986 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CHN1P15882 459 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 TIMP2P16035 220 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PRKCAP17252 672 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 GJA1P17302 382 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CKMT2P17540 419 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CHRNB2P17787 502 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 HNRNPA2B1P22626 353 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 CALB2P22676 271 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 S100A1P23297 94 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CFL1P23528 166 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 MAP4P27816 1152 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 TNFRSF8P28908 595 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CCND3P30281 292 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 SLC7A1P30825 629 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CHRNA3P32297 505 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PGM1P36871 562 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 BMPR1AP36894 532 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 GARSP41250 739 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 NPY4RP50391 375 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CLCNKBP51801 687 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 GFRA1P56159 465 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 ATP5IP56385 69 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 PTENP60484 403 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RPP30P78346 268 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms