RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ANKRD36A6QL64 1941 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 ZZEF1O43149 2961 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 SRRM3A6NNA2 597 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-225ENST00000569245 B4DGG1 531 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 NDC80O14777 642 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 ASMTLO95671 621 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 NFKB1P19838 968 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 MCM3P25205 808 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 TNFRSF8P28908 595 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 ADCY8P40145 1251 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 SPINT3P49223 89 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 ILF3Q12906 894 aaKnown RBP eCLIP14.38□□□□□ -0.11
COMMD4-225ENST00000569245 TRIP13Q15645 432 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-225ENST00000569245 ANKRD20A2Q5SQ80 823 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 ANKRD20A1Q5TYW2 823 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 ANKRD20A3Q5VUR7 823 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 MARK2Q7KZI7 788 aaKnown RBP14.38□□□□□ -0.11
COMMD4-225ENST00000569245 LYSMD3Q7Z3D4 306 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 PRUNE1Q86TP1 453 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 TRIM74Q86UV6 250 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 NLRP8Q86W28 1048 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 PROSER1Q86XN7 944 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 ZNF567Q8N184 647 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 EIF1ADQ8N9N8 165 aaKnown RBP14.38□□□□□ -0.11
COMMD4-225ENST00000569245 BBOF1Q8ND07 529 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 CCL4L1Q8NHW4 92 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 LRRC45Q96CN5 670 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 NXPE2Q96DL1 559 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 TRIB3Q96RU7 358 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 AGAP2Q99490 1192 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 CCDC3Q9BQI4 270 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 GSDMCQ9BYG8 508 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 FRMD8Q9BZ67 464 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-225ENST00000569245 GPR63Q9BZJ6 419 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 FAM114A2Q9NRY5 505 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 WHRNQ9P202 907 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 FAM153AQ9UHL3 310 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 RAB21Q9UL25 225 aa14.38□□□□□ -0.11
COMMD4-225ENST00000569245 GOLGA4Q13439 2230 aaKnown RBP14.37□□□□□ -0.11
COMMD4-225ENST00000569245 RGSL1A5PLK6 1076 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 KRT37O76014 449 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 NDST3O95803 873 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 SOD1P00441 154 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 RPL21P46778 160 aaKnown RBP14.37□□□□□ -0.11
COMMD4-225ENST00000569245 WNT3AP56704 352 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 GPS1Q13098 491 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 CUL1Q13616 776 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 SLC14A2Q15849 920 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 PERM1Q5SV97 790 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 CDCP2Q5VXM1 449 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 ALS2CLQ60I27 953 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 PCGF5Q86SE9 256 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 RAVER1Q8IY67 606 aaKnown RBP14.37□□□□□ -0.11
COMMD4-225ENST00000569245 CACTIN-AS1Q8N1I8 211 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 SLC25A41Q8N5S1 370 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 CCDC110Q8TBZ0 833 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 TADA1Q96BN2 335 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 SNF8Q96H20 258 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 PARD6BQ9BYG5 372 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 FAM129AQ9BZQ8 928 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 MAGEE1Q9HCI5 957 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 TRNAU1APQ9NX07 287 aaKnown RBP14.37□□□□□ -0.11
COMMD4-225ENST00000569245 RSPH14Q9UHP6 348 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 SLC17A4Q9Y2C5 497 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 SNX24Q9Y343 169 aa14.37□□□□□ -0.11
COMMD4-225ENST00000569245 LRRK1Q38SD2 2015 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 UQCRHLA0A096LP55 91 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 ESYT3A0FGR9 886 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 TAF4O00268 1085 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 DNALI1O14645 258 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-225ENST00000569245 CSO75390 466 aaKnown RBP14.36□□□□□ -0.11
COMMD4-225ENST00000569245 SEC31AO94979 1220 aaKnown RBP14.36□□□□□ -0.11
COMMD4-225ENST00000569245 FUCA1P04066 466 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 CAPNS1P04632 268 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 IVLP07476 585 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 UQCRHP07919 91 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 CD68P34810 354 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-225ENST00000569245 FDFT1P37268 417 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 VPS41P49754 854 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 BIRC2Q13490 618 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 KCTD19Q17RG1 926 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-225ENST00000569245 PARP6Q2NL67 630 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 ITPRIPL1Q6GPH6 555 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 SLC30A9Q6PML9 568 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 RBM44Q6ZP01 1051 aaKnown RBP14.36□□□□□ -0.11
COMMD4-225ENST00000569245 ARHGEF18Q6ZSZ5 1173 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 GALNT13Q8IUC8 556 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 IPMKQ8NFU5 416 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 OR6C4Q8NGE1 309 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 GPBAR1Q8TDU6 330 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 PTCD2Q8WV60 388 aaKnown RBP14.36□□□□□ -0.11
COMMD4-225ENST00000569245 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.36□□□□□ -0.11
COMMD4-225ENST00000569245 CCDC74AQ96AQ1 378 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 SRPK1Q96SB4 655 aaKnown RBP14.36□□□□□ -0.11
COMMD4-225ENST00000569245 SPATA16Q9BXB7 569 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 TRIM31Q9BZY9 425 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 NRSN2Q9GZP1 204 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 DPH5Q9H2P9 285 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 RAD18Q9NS91 495 aa14.36□□□□□ -0.11
COMMD4-225ENST00000569245 GRHL1Q9NZI5 618 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms