RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 TADA1Q96BN2 335 aa18.21■□□□□ 0.51
PKD1-235ENST00000568591 VPS50Q96JG6 964 aa18.21■□□□□ 0.51
PKD1-235ENST00000568591 EXOC2Q96KP1 924 aa18.21■□□□□ 0.51
PKD1-235ENST00000568591 BIRC8Q96P09 236 aa18.21■□□□□ 0.51
PKD1-235ENST00000568591 AARSD1Q9BTE6 412 aaKnown RBP18.21■□□□□ 0.51
PKD1-235ENST00000568591 C9orf16Q9BUW7 83 aa18.21■□□□□ 0.51
PKD1-235ENST00000568591 LTB4R2Q9NPC1 389 aa18.21■□□□□ 0.51
PKD1-235ENST00000568591 TMEM248Q9NWD8 314 aa18.21■□□□□ 0.51
PKD1-235ENST00000568591 TLR6Q9Y2C9 796 aa18.21■□□□□ 0.51
PKD1-235ENST00000568591 SPO11Q9Y5K1 396 aa18.21■□□□□ 0.51
PKD1-235ENST00000568591 MYO16Q9Y6X6 1858 aa18.21■□□□□ 0.5
PKD1-235ENST00000568591 RHOBTB1O94844 696 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 CYBBP04839 570 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 STC1P52823 247 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 OR4D2P58180 307 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 ESRRGP62508 458 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 MTA1Q13330 715 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 TMEM214Q6NUQ4 689 aaKnown RBP18.2■□□□□ 0.5
PKD1-235ENST00000568591 XKR5Q6UX68 686 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 CFAP52Q8N1V2 620 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 TEX26Q8N6G2 289 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 PACRGLQ8N7B6 248 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 OR4L1Q8NH43 312 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 C1orf74Q96LT6 269 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 ZBED2Q9BTP6 218 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 TRIM62Q9BVG3 475 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 OSBPL6Q9BZF3 934 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 TRIM15Q9C019 465 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 CATSPERZQ9NTU4 200 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 SLC45A1Q9Y2W3 748 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 LAMA3Q16787 3333 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 DOCK4Q8N1I0 1966 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 A0A1W2PP18 115 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 ELK4P28324 431 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 YWHAHQ04917 246 aaPredicted RBP18.2■□□□□ 0.5
PKD1-235ENST00000568591 IRAK1BP1Q5VVH5 260 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 PRMT9Q6P2P2 845 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 SLC2A7Q6PXP3 512 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 ZC3H15Q8WU90 426 aaKnown RBP18.2■□□□□ 0.5
PKD1-235ENST00000568591 SEPT8Q92599 483 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 SGCDQ92629 289 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 PARK7Q99497 189 aaKnown RBP18.2■□□□□ 0.5
PKD1-235ENST00000568591 KATNAL1Q9BW62 490 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 GID8Q9NWU2 228 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 CIDEBQ9UHD4 219 aa18.2■□□□□ 0.5
PKD1-235ENST00000568591 A0A0D9SEW6 157 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 TRIM64A6NGJ6 449 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 GPR39O43194 453 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 RPP40O75818 363 aaKnown RBP18.19■□□□□ 0.5
PKD1-235ENST00000568591 IDO1P14902 403 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 SUOXP51687 545 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 ACVR1Q04771 509 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 RCAN2Q14206 197 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 SELPLGQ14242 412 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 AARS2Q5JTZ9 985 aaKnown RBP18.19■□□□□ 0.5
PKD1-235ENST00000568591 NANOGP8Q6NSW7 305 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 MRNIPQ6NTE8 343 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 DHRS4L2Q6PKH6 230 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 KCTD8Q6ZWB6 473 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 LRRC49Q8IUZ0 686 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 THEM5Q8N1Q8 247 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 RPRD1AQ96P16 312 aaPredicted RBP18.19■□□□□ 0.5
PKD1-235ENST00000568591 GPR21Q99679 349 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 SEZ6LQ9BYH1 1024 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 NANOGQ9H9S0 305 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 SMPD3Q9NY59 655 aaPredicted RBP18.19■□□□□ 0.5
PKD1-235ENST00000568591 H0Y858 1186 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 GIPC1O14908 333 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 OR1I1O60431 355 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 RAMP2O60895 175 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 PCNAP12004 261 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 RPS9P46781 194 aaKnown RBP18.19■□□□□ 0.5
PKD1-235ENST00000568591 RGRP47804 291 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 GNASQ5JWF2 1037 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 ZNF280BQ86YH2 543 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 TNIP2Q8NFZ5 429 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 FUBP1Q96AE4 644 aaKnown RBP18.19■□□□□ 0.5
PKD1-235ENST00000568591 CDKN2AIPNLQ96HQ2 116 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 TLR9Q9NR96 1032 aa18.19■□□□□ 0.5
PKD1-235ENST00000568591 BTN3A1O00481 513 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 KERAO60938 352 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 OR1E1P30953 314 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 KCNK10P57789 538 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 NRG1Q02297 640 aaPredicted RBP18.18■□□□□ 0.5
PKD1-235ENST00000568591 TMTC4Q5T4D3 741 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 MRPL10Q7Z7H8 261 aaKnown RBP18.18■□□□□ 0.5
PKD1-235ENST00000568591 DHRSXQ8N5I4 330 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 RHEBL1Q8TAI7 183 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 ADAMTS16Q8TE57 1224 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.18■□□□□ 0.52e-7■■■■■ 62.8
PKD1-235ENST00000568591 KIAA1191Q96A73 305 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 BIRC7Q96CA5 298 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 RNF145Q96MT1 663 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 ADAM2Q99965 735 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 TFB2MQ9H5Q4 396 aaKnown RBP18.18■□□□□ 0.5
PKD1-235ENST00000568591 AIG1Q9NVV5 245 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 TCF3P15923 654 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 CAPGP40121 348 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 THPOP40225 353 aa18.18■□□□□ 0.5
PKD1-235ENST00000568591 HK3P52790 923 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms