RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 LINGO1Q96FE5 620 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 LBHD1Q9BQE6 289 aaPredicted RBP18■□□□□ 0.47
SMPD3-211ENST00000568373 HS3ST2Q9Y278 367 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 PCDHB1Q9Y5F3 818 aa18■□□□□ 0.47
SMPD3-211ENST00000568373 EEF1DP29692 281 aaKnown RBP17.99■□□□□ 0.47
SMPD3-211ENST00000568373 GTF2A1P52655 376 aaPredicted RBP17.99■□□□□ 0.47
SMPD3-211ENST00000568373 SESN3P58005 492 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 SNRPD1P62314 119 aaKnown RBP17.99■□□□□ 0.47
SMPD3-211ENST00000568373 FPGSQ05932 587 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 TEAD2Q15562 447 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 PPP1R3AQ16821 1122 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 FUT11Q495W5 492 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 UGT3A1Q6NUS8 523 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 C16orf89Q6UX73 402 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 TMEM25Q86YD3 366 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 FBXW8Q8N3Y1 598 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 EEF1AKMT1Q8WVE0 214 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 BADQ92934 168 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 ISG20Q96AZ6 181 aaKnown RBP17.99■□□□□ 0.47
SMPD3-211ENST00000568373 RCN3Q96D15 328 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 C19orf60Q96EN9 201 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 NSUN5Q96P11 429 aaKnown RBP17.99■□□□□ 0.47
SMPD3-211ENST00000568373 MID1IP1Q9NPA3 183 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 ZNF106Q9H2Y7 1883 aaKnown RBP17.99■□□□□ 0.47
SMPD3-211ENST00000568373 PPP6CO00743 305 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 UBDO15205 165 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 KLK8O60259 260 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 MOSPD3O75425 235 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 CLDN7O95471 211 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 ARSAP15289 507 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 CLCN7P51798 805 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 MTTPP55157 894 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 RTL10Q7L3V2 364 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 SNX20Q7Z614 316 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 ZSWIM9Q86XI8 627 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 CPNE9Q8IYJ1 553 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 DSELQ8IZU8 1212 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 POF1BQ8WVV4 589 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 VOPP1Q96AW1 172 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 MCM8Q9UJA3 840 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 APPL1Q9UKG1 709 aa17.99■□□□□ 0.47
SMPD3-211ENST00000568373 PRPF19Q9UMS4 504 aaKnown RBP17.99■□□□□ 0.47
SMPD3-211ENST00000568373 IQCF5A8MTL0 148 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 STX16-NPEPL1H3BU86 382 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 STX16O14662 325 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 TLL1O43897 1013 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 PTPN2P17706 415 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 CLCQ05315 142 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 LCP2Q13094 533 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 NFATC2Q13469 925 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 SQLEQ14534 574 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 TMEM240Q5SV17 173 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 C22orf39Q6P5X5 142 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 LARP4Q71RC2 724 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMPD3-211ENST00000568373 SERPINA9Q86WD7 417 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 TRPC4APQ8TEL6 797 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 C1QTNF3Q9BXJ4 246 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 SARS2Q9NP81 518 aaKnown RBP17.98■□□□□ 0.47
SMPD3-211ENST00000568373 IL26Q9NPH9 171 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 TLR9Q9NR96 1032 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 LRRC42Q9Y546 428 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 DNAJC15Q9Y5T4 150 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 LAMA3Q16787 3333 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 MYO7AQ13402 2215 aa17.98■□□□□ 0.47
SMPD3-211ENST00000568373 GOLGA8CPA6NN73 597 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 AZIN1O14977 448 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 GRM6O15303 877 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 SORBS2O94875 1100 aaKnown RBP17.97■□□□□ 0.47
SMPD3-211ENST00000568373 RPS17P08708 135 aaKnown RBP17.97■□□□□ 0.47
SMPD3-211ENST00000568373 ZNF7P17097 686 aaPredicted RBP17.97■□□□□ 0.47
SMPD3-211ENST00000568373 ITGALP20701 1170 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 NAA20P61599 178 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 MYLK3Q32MK0 819 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 ARHGAP15Q53QZ3 475 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 FAM219BQ5XKK7 198 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 KANK2Q63ZY3 851 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 ANKS6Q68DC2 871 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 TLDC1Q6P9B6 456 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 HPS6Q86YV9 775 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 SPPL3Q8TCT6 385 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 CCDC124Q96CT7 223 aaKnown RBP17.97■□□□□ 0.47
SMPD3-211ENST00000568373 TUBGCP5Q96RT8 1024 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 LYSMD1Q96S90 227 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 TTC1Q99614 292 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 CLPBQ9H078 707 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 ASB8Q9H765 288 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 EFCAB1Q9HAE3 211 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 TDP1Q9NUW8 608 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 PRKAG2Q9UGJ0 569 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 POMPQ9Y244 141 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 DHRS7Q9Y394 339 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 RANBP2P49792 3224 aaKnown RBP17.97■□□□□ 0.47
SMPD3-211ENST00000568373 NEDD8-MDP1E9PL57 170 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 GPC4O75487 556 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 RHOP08100 348 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 RPSAP08865 295 aaKnown RBP17.97■□□□□ 0.47
SMPD3-211ENST00000568373 BPIP17213 487 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 RPS3P23396 243 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMPD3-211ENST00000568373 VHLP40337 213 aa17.97■□□□□ 0.47
SMPD3-211ENST00000568373 ERFP50548 548 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms