RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 DENND5AQ6IQ26 1287 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 RETREG3Q86VR2 466 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 ANKRD46Q86W74 232 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 SVOPQ8N4V2 548 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 NDNFQ8TB73 568 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 PNPT1Q8TCS8 783 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 GBA3Q9H227 469 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 INTS10Q9NVR2 710 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 DUS2Q9NX74 493 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 TRMT6Q9UJA5 497 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 FZD10Q9ULW2 581 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 ZNF142P52746 1687 aaPredicted RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 PRKD3O94806 890 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 LRATO95237 230 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 RASAL1O95294 804 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 NTRK1P04629 796 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 RFC2P35250 354 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 POLR2IP36954 125 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 MRPL28Q13084 256 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 PTPRCAPQ14761 206 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 SKIV2LQ15477 1246 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 STRADAQ7RTN6 431 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 DPP9Q86TI2 863 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 SETD9Q8NE22 299 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 SPPL2AQ8TCT8 520 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 STON2Q8WXE9 905 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 TOP1MTQ969P6 601 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 C3orf30Q96M34 536 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 DCSTAMPQ9H295 470 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 ADAMTS10Q9H324 1103 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 CMTM6Q9NX76 183 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 KLQ9UEF7 1012 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 BBIP1A8MTZ0 92 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 hCG_2039718K7EN88 272 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 ENPP3O14638 875 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 RECQL4O94761 1208 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 FARP2O94887 1054 aaPredicted RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 C8BP07358 591 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 IGFBP5P24593 272 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 PTPN9P43378 593 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 MED22Q15528 200 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 ZNF789Q5FWF6 425 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 EFL1Q7Z2Z2 1120 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 FLCNQ8NFG4 579 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 PHF21AQ96BD5 680 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 MYOCQ99972 504 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 TTYH2Q9BSA4 534 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 SLAMF8Q9P0V8 285 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 ERVK-18Q9QC07 812 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 POLG2Q9UHN1 485 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 EIF3LQ9Y262 564 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 ARIH1Q9Y4X5 557 aaPredicted RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 SIPA1L3O60292 1781 aaPredicted RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 RGS10O43665 173 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 OR2B6P58173 313 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 OR4D2P58180 307 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 BTG3Q14201 252 aaPredicted RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 STEAP4Q687X5 459 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 TMEM135Q86UB9 458 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 LSMEM2Q8N112 164 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 LZTR1Q8N653 840 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 SLCO4A1Q96BD0 722 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 REXO5Q96IC2 774 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 TEKT5Q96M29 485 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 CATSPERBQ9H7T0 1116 aa10.84□□□□□ -0.67
PALB2-206ENST00000568219 SAMHD1Q9Y3Z3 626 aaKnown RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 POLR3HQ9Y535 204 aaPredicted RBP10.84□□□□□ -0.67
PALB2-206ENST00000568219 A0A1B0GUL6 1792 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 TYW5A2RUC4 315 aaKnown RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 YJEFN3A6XGL0 299 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 SLC6A2P23975 617 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 ATP6V0D1P61421 351 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 KRR1Q13601 381 aaKnown RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 PSMD5Q16401 504 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 SLC36A3Q495N2 470 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 NOL9Q5SY16 702 aaKnown RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 LEMD2Q8NC56 503 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 B3GALNT2Q8NCR0 500 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 SLC35F5Q8WV83 523 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 AFG1LQ8WV93 481 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 FEM1CQ96JP0 617 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 IL12RB2Q99665 862 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 GLOD4Q9HC38 313 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 COQ3Q9NZJ6 369 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 GALPQ9UBC7 116 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 OGDHLQ9ULD0 1010 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 UBQLN1Q9UMX0 589 aaKnown RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 TCRBV3S1A0A5B6 114 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 DYNC1LI2O43237 492 aaPredicted RBP10.83□□□□□ -0.68
PALB2-206ENST00000568219 PRKCGP05129 697 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 CLCN5P51795 746 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 NUDT6P53370 316 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 PPP2R2DQ66LE6 453 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 PLEKHG7Q6ZR37 379 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 TRIM48Q8IWZ4 208 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 DEPDC4Q8N2C3 294 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 CAMKK1Q8N5S9 505 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 STAG3L4Q8TBR4 150 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 FRS2Q8WU20 508 aa10.83□□□□□ -0.68
PALB2-206ENST00000568219 ATL1Q8WXF7 558 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms