RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 STAMBPL1Q96FJ0 436 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 SGSM3Q96HU1 749 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 EBNA1BP2Q99848 306 aaKnown RBP17.84■□□□□ 0.45
COMMD4-222ENST00000568034 ASB8Q9H765 288 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 IL21RQ9HBE5 538 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 ARFGAP3Q9NP61 516 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 FAM114A2Q9NRY5 505 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 SLC17A4Q9Y2C5 497 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 PCYT1BQ9Y5K3 369 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-222ENST00000568034 FRYLO94915 3013 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 MAGEB16A2A368 324 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 GFRA3O60609 400 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 MTX2O75431 263 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 USP1O94782 785 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 SLU7O95391 586 aaKnown RBP17.83■□□□□ 0.44
COMMD4-222ENST00000568034 SYPP08247 313 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 RHOXF2BP0C7M4 288 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 ITGALP20701 1170 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 ELK3P41970 407 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 PTK2BQ14289 1009 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 HLA-BQ31612 363 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 TEX35Q5T0J7 233 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 GPRC6AQ5T6X5 926 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 PSAPL1Q6NUJ1 521 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 AFTPHQ6ULP2 937 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 ENPP7Q6UWV6 458 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 PHYKPLQ8IUZ5 450 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 PNPLA1Q8N8W4 532 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 DDHD1Q8NEL9 900 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 OR56A4Q8NGH8 313 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 ZNF669Q96BR6 464 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-222ENST00000568034 LRRC39Q96DD0 335 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 SCARF2Q96GP6 870 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-222ENST00000568034 ELF4Q99607 663 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-222ENST00000568034 RHOXF2Q9BQY4 288 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 PHACTR1Q9C0D0 580 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 TCEAL2Q9H3H9 227 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-222ENST00000568034 FAM96AQ9H5X1 160 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 MRPL40Q9NQ50 206 aaKnown RBP17.83■□□□□ 0.44
COMMD4-222ENST00000568034 SAMD15Q9P1V8 674 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 CHMP2BQ9UQN3 213 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 TMEM98Q9Y2Y6 226 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 MAD1L1Q9Y6D9 718 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 RPS6KL1Q9Y6S9 549 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 CABIN1Q9Y6J0 2220 aa17.83■□□□□ 0.44
COMMD4-222ENST00000568034 CDX4O14627 284 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-222ENST00000568034 TNFRSF10CO14798 259 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 SLC25A14O95258 325 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-222ENST00000568034 NME1P15531 152 aaKnown RBP17.82■□□□□ 0.44
COMMD4-222ENST00000568034 PGAM1P18669 254 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 HTR1BP28222 390 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 RXRGP48443 463 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 POLD2P49005 469 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 CARSP49589 748 aaKnown RBP17.82■□□□□ 0.44
COMMD4-222ENST00000568034 CACNG1Q06432 222 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 PDIA2Q13087 525 aaKnown RBP17.82■□□□□ 0.44
COMMD4-222ENST00000568034 SEMA3AQ14563 771 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 ZNF542PQ5EBM4 170 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 ZRANB3Q5FWF4 1079 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 HP1BP3Q5SSJ5 553 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-222ENST00000568034 DOK6Q6PKX4 331 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 IL27RAQ6UWB1 636 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 ADGRG6Q86SQ4 1221 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 NXPE1Q8N323 547 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 MINDY1Q8N5J2 469 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 TSACCQ96A04 125 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-222ENST00000568034 GAREM1Q9H706 876 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 MARCH4Q9P2E8 410 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-222ENST00000568034 ATXN10Q9UBB4 475 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 KLQ9UEF7 1012 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.82■□□□□ 0.44
COMMD4-222ENST00000568034 SLC30A1Q9Y6M5 507 aa17.82■□□□□ 0.44
COMMD4-222ENST00000568034 A0A1B0GTQ1 180 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 PRSS38A1L453 326 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 EIF3HO15372 352 aaKnown RBP eCLIP17.81■□□□□ 0.44
COMMD4-222ENST00000568034 DNAJC6O75061 913 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 VAPBO95292 243 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 CSF2P04141 144 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 KELP23276 732 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 SRP54P61011 504 aaKnown RBP17.81■□□□□ 0.44
COMMD4-222ENST00000568034 PRAMEP78395 509 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 B4GALNT1Q00973 533 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 CRYMQ14894 314 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 SMAD1Q15797 465 aaKnown RBP17.81■□□□□ 0.44
COMMD4-222ENST00000568034 GPR33Q49SQ1 333 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 STEAP4Q687X5 459 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 UNC5AQ6ZN44 842 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 ANKMY2Q8IV38 441 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 RBFAQ8N0V3 343 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 OXR1Q8N573 874 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 OR6P1Q8NGX9 317 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 OR4L1Q8NH43 312 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 EDEM2Q9BV94 578 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 GTPBP2Q9BX10 602 aaKnown RBP17.81■□□□□ 0.44
COMMD4-222ENST00000568034 FAM129AQ9BZQ8 928 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 TRIM39Q9HCM9 518 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 RRAGDQ9NQL2 400 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-222ENST00000568034 IL1RAPL1Q9NZN1 696 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 VPS18Q9P253 973 aa17.81■□□□□ 0.44
COMMD4-222ENST00000568034 CRLS1Q9UJA2 301 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms