RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CD72P21854 359 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 MC4RP32245 332 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 PTGER3P43115 390 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 CTSOP43234 321 aaPredicted RBP14.53□□□□□ -0.08
COMMD4-221ENST00000567935 DGKGP49619 791 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 CCNHP51946 323 aaPredicted RBP14.53□□□□□ -0.08
COMMD4-221ENST00000567935 ITGA9Q13797 1035 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 MLF2Q15773 248 aaPredicted RBP14.53□□□□□ -0.08
COMMD4-221ENST00000567935 GALNTL6Q49A17 601 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 GPR33Q49SQ1 333 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 ZNF789Q5FWF6 425 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 GRAMD4Q6IC98 578 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 BRAT1Q6PJG6 821 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 TPRG1Q6ZUI0 275 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 SLC22A9Q8IVM8 553 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 KDF1Q8NAX2 398 aaPredicted RBP14.53□□□□□ -0.08
COMMD4-221ENST00000567935 PIWIL2Q8TC59 973 aaKnown RBP14.53□□□□□ -0.08
COMMD4-221ENST00000567935 HCAR2Q8TDS4 363 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 STON2Q8WXE9 905 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 SCRN2Q96FV2 425 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 RMDN2Q96LZ7 410 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 MCCC1Q96RQ3 725 aaPredicted RBP14.53□□□□□ -0.08
COMMD4-221ENST00000567935 NDNQ99608 321 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 TUBB6Q9BUF5 446 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 TNKS2Q9H2K2 1166 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 LTB4R2Q9NPC1 389 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 IGSF5Q9NSI5 407 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 ABCF3Q9NUQ8 709 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 ZNF358Q9NW07 568 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 TAS2R13Q9NYV9 303 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 FKBPLQ9UIM3 349 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 RAB23Q9ULC3 237 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 SLC12A4Q9UP95 1085 aa14.53□□□□□ -0.08
COMMD4-221ENST00000567935 C1orf232A0A0U1RR37 186 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 SLCO1B7G3V0H7 640 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 H3BMM5 538 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 DNAJC6O75061 913 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 LRP3O75074 770 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 PIGNO95427 931 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 ITGALP20701 1170 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 ATP5F1P24539 256 aaPredicted RBP14.52□□□□□ -0.09
COMMD4-221ENST00000567935 STK19P49842 368 aaPredicted RBP14.52□□□□□ -0.09
COMMD4-221ENST00000567935 ATP6V0D1P61421 351 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 ACTN3Q08043 901 aaPredicted RBP14.52□□□□□ -0.09
COMMD4-221ENST00000567935 OVGP1Q12889 678 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 SEMA3AQ14563 771 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 PTPRCAPQ14761 206 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 EIF4HQ15056 248 aaKnown RBP14.52□□□□□ -0.09
COMMD4-221ENST00000567935 CSRP2Q16527 193 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 ACCSLQ4AC99 568 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 TECRLQ5HYJ1 363 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 FAM78AQ5JUQ0 283 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 FAM91A1Q658Y4 838 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 UGT3A1Q6NUS8 523 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 GET4Q7L5D6 327 aaPredicted RBP14.52□□□□□ -0.09
COMMD4-221ENST00000567935 LYSMD3Q7Z3D4 306 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 PIWIL4Q7Z3Z4 852 aaKnown RBP14.52□□□□□ -0.09
COMMD4-221ENST00000567935 TMEM151AQ8N4L1 468 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 GRIN3AQ8TCU5 1115 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 HEXDCQ8WVB3 486 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 NXNL1Q96CM4 212 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 RPL10LQ96L21 214 aaKnown RBP14.52□□□□□ -0.09
COMMD4-221ENST00000567935 TMEM120AQ9BXJ8 343 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 OSBPL6Q9BZF3 934 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 TXLNGQ9NUQ3 528 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 XPR1Q9UBH6 696 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 LHX6Q9UPM6 363 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.52□□□□□ -0.09
COMMD4-221ENST00000567935 CRYL1Q9Y2S2 319 aa14.52□□□□□ -0.09
COMMD4-221ENST00000567935 ZNF106Q9H2Y7 1883 aaKnown RBP14.52□□□□□ -0.09
COMMD4-221ENST00000567935 A0A0G2JND7 137 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 TSPAN11A1L157 253 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 TK2O00142 265 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 NPHS1O60500 1241 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 VPS26AO75436 327 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 SRP72O76094 671 aaKnown RBP14.51□□□□□ -0.09
COMMD4-221ENST00000567935 F7P08709 466 aaPredicted RBP14.51□□□□□ -0.09
COMMD4-221ENST00000567935 CISD3P0C7P0 127 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 CCDC166P0CW27 439 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 TDGF1P13385 188 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 PKMP14618 531 aaKnown RBP14.51□□□□□ -0.09
COMMD4-221ENST00000567935 ALOX15P16050 662 aaPredicted RBP14.51□□□□□ -0.09
COMMD4-221ENST00000567935 CTPS1P17812 591 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 MAGEA9P43362 315 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 CDKN2DP55273 166 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 NAA20P61599 178 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 ST8SIA6P61647 398 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 XIAPP98170 497 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 PFKPQ01813 784 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 BNIP1Q12981 228 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 PDAP1Q13442 181 aaKnown RBP14.51□□□□□ -0.09
COMMD4-221ENST00000567935 PEX6Q13608 980 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 CSHL1Q14406 222 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 CDKN3Q16667 212 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 ZRANB3Q5FWF4 1079 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 ZNF549Q6P9A3 640 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 GDPD4Q6W3E5 623 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 DPY19L3Q6ZPD9 716 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 PRR23BQ6ZRT6 265 aa14.51□□□□□ -0.09
COMMD4-221ENST00000567935 SNX20Q7Z614 316 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms