RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CHRM5P08912 532 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P13-202ENST00000567704 RAP2AP10114 183 aa12.34□□□□□ -0.43
CSPG4P13-202ENST00000567704 TIE1P35590 1138 aa12.34□□□□□ -0.43
CSPG4P13-202ENST00000567704 NPTX1Q15818 432 aa12.34□□□□□ -0.43
CSPG4P13-202ENST00000567704 RNASE12Q5GAN4 147 aaKnown RBP12.34□□□□□ -0.43
CSPG4P13-202ENST00000567704 ERICH5Q6P6B1 374 aa12.34□□□□□ -0.43
CSPG4P13-202ENST00000567704 CNPPD1Q9BV87 410 aa12.34□□□□□ -0.43
CSPG4P13-202ENST00000567704 EHD1Q9H4M9 534 aa12.34□□□□□ -0.43
CSPG4P13-202ENST00000567704 TMEM9Q9P0T7 183 aa12.34□□□□□ -0.43
CSPG4P13-202ENST00000567704 UBE2QL1A1L167 161 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 FAM159BA6NKW6 160 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 hCG_2039718K7EN88 272 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 OR56A5P0C7T3 313 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 POLR2EP19388 210 aaKnown RBP12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 AFTPHQ6ULP2 937 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 CHMP1BQ7LBR1 199 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 IGDCC3Q8IVU1 814 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 SVOPLQ8N434 492 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 GPR156Q8NFN8 814 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 DENND1AQ8TEH3 1009 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 MRPL48Q96GC5 212 aaKnown RBP12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 SPATC1LQ9H0A9 340 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 MED28Q9H204 178 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 DCSTAMPQ9H295 470 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 NFAT5O94916 1531 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 RPLP0P05388 317 aaKnown RBP12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 MBL2P11226 248 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 PORP16435 677 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 CDK18Q07002 472 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 LCP2Q13094 533 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 MBLAC2Q68D91 279 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 RHBDF2Q6PJF5 856 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 EXOC2Q96KP1 924 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 B3GALT6Q96L58 329 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 ABCC13Q9NSE7 274 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 DTLQ9NZJ0 730 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 SIRPGQ9P1W8 387 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 TLL2Q9Y6L7 1015 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 GOLGA4Q13439 2230 aaKnown RBP12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 T-ENOLP0DO92 83 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 GNPDA1P46926 289 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 UGT2B15P54855 530 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 PUDPQ08623 228 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 ACAP2Q15057 778 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 GPR162Q16538 588 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 RBM48Q5RL73 367 aaKnown RBP12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 RAP1GAP2Q684P5 730 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 ERMP1Q7Z2K6 904 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 DAW1Q8N136 415 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 OR9I1Q8NGQ6 314 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 MLPHQ9BV36 600 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 MROH8Q9H579 483 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 SPATA7Q9P0W8 599 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 DNAJB9Q9UBS3 223 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 BCL9O00512 1426 aa12.33□□□□□ -0.44
CSPG4P13-202ENST00000567704 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 SCELO95171 688 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 MT-CYBP00156 380 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 EPORP19235 508 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 PRKAG1P54619 331 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 CDHR3Q6ZTQ4 885 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 RELL1Q8IUW5 271 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 TRPV3Q8NET8 790 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 GATA6Q92908 595 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 GAD1Q99259 594 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 FBXO44Q9H4M3 255 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 MCUBQ9NWR8 336 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 RCOR3Q9P2K3 495 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 ANKRD26Q9UPS8 1709 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 UBXN8O00124 270 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 CPNE3O75131 537 aaKnown RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 FABP3P05413 133 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 IL7RP16871 459 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 HOXD13P35453 343 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 THPOP40225 353 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 STARP49675 285 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 ATXN1P54253 815 aaKnown RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 LCN1P1Q5VSP4 162 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 OR52E8Q6IFG1 317 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 STYK1Q6J9G0 422 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 BHLHB9Q6PI77 547 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 DET1Q7L5Y6 550 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZDHHC21Q8IVQ6 265 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZZZ3Q8IYH5 903 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 CLIP4Q8N3C7 705 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 RASSF5Q8WWW0 418 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 ESAMQ96AP7 390 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 C11orf24Q96F05 449 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 GBA3Q9H227 469 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 GDAP2Q9NXN4 497 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 NFASCO94856 1347 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 ANKDD1BA6NHY2 528 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 PGRMC2O15173 223 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 RCVRNP35243 200 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 KCNJ11Q14654 390 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 DACT2Q5SW24 774 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 OR8H3Q8N146 312 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 CMASQ8NFW8 434 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 NRG4Q8WWG1 115 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 NXF3Q9H4D5 531 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms