RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	RWDD2B	P57060	319 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	DCDC1	P59894	354 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	EIF3I	Q13347	325 aa	Known RBP	6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	SQSTM1	Q13501	440 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	NR1D2	Q14995	579 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	CLPP	Q16740	277 aa	Predicted RBP	6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	AMZ1	Q400G9	498 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	CCDC181	Q5TID7	509 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	BROX	Q5VW32	411 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	PDPK2P	Q6A1A2	396 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	KDELC1	Q6UW63	502 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	RAD9B	Q6WBX8	426 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	CHST15	Q7LFX5	561 aa	Predicted RBP	6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZNF438	Q7Z4V0	828 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	KIAA1328	Q86T90	577 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	SPACA3	Q8IXA5	215 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	NAGS	Q8N159	534 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZNF567	Q8N184	647 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	TXLNB	Q8N3L3	684 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	TRAM1L1	Q8N609	369 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	PATE1	Q8WXA2	126 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	HTR3C	Q8WXA8	447 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	TMEM159	Q96B96	161 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	HAUS1	Q96CS2	278 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	CCDC97	Q96F63	343 aa	Predicted RBP	6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	NAF1	Q96HR8	494 aa	Known RBP	6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	QKI	Q96PU8	341 aa	Known RBP eCLIP	6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	FCRL5	Q96RD9	977 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	FERMT1	Q9BQL6	677 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZSCAN5A	Q9BUG6	496 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	OR2AG1	Q9H205	316 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	PRORY	Q9H606	182 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	KLHL8	Q9P2G9	620 aa	Predicted RBP	6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	IMPACT	Q9P2X3	320 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	ATXN10	Q9UBB4	475 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	REXO2	Q9Y3B8	237 aa	Known RBP	6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZNF711	Q9Y462	761 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	PRKAB1	Q9Y478	270 aa		6.85	□□□□□ -1.31
SF3B3-209	ENST00000567635	GPR89A	B7ZAQ6	455 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	AURKA	O14965	403 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	KMO	O15229	486 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	NVL	O15381	856 aa	Known RBP	6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	KLK10	O43240	276 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	VEGFD	O43915	354 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ANXA9	O76027	345 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	STK10	O94804	968 aa	Known RBP	6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	TJP3	O95049	919 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	AGT	P01019	485 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ITGA2B	P08514	1039 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	JMJD7	P0C870	316 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	GPR89B	P0CG08	455 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	PYGM	P11217	842 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ACP5	P13686	325 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	SLC2A4	P14672	509 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZNF8	P17098	575 aa	Predicted RBP	6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	CTNNA2	P26232	953 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	RBL1	P28749	1068 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	CDC25B	P30305	580 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	SLC5A2	P31639	672 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	PTPN7	P35236	360 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	HMGCL	P35914	325 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	CLCNKA	P51800	687 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	VAV2	P52735	878 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	PDX1	P52945	283 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	GEM	P55040	296 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	UCN	P55089	124 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	EIF3E	P60228	445 aa	Known RBP	6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	TLE3	Q04726	772 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	KIF5A	Q12840	1032 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	MPP3	Q13368	585 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	NOMO1	Q15155	1222 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	SLC1A5	Q15758	541 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	SIRPB2	Q5JXA9	342 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZNF569	Q5MCW4	686 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZNF648	Q5T619	568 aa	Predicted RBP	6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	PHF19	Q5T6S3	580 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ALS2CL	Q60I27	953 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	IYD	Q6PHW0	289 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	DARS2	Q6PI48	645 aa	Known RBP	6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZNF574	Q6ZN55	896 aa	Predicted RBP	6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	GPR155	Q7Z3F1	870 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	TMPRSS9	Q7Z410	1059 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	PEX26	Q7Z412	305 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ADGRG6	Q86SQ4	1221 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	CLEC14A	Q86T13	490 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	JAML	Q86YT9	394 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	SLITRK4	Q8IW52	837 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	SFRP1	Q8N474	314 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	SLC25A41	Q8N5S1	370 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	LRRC57	Q8N9N7	239 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ACRBP	Q8NEB7	543 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ACTL9	Q8TC94	416 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	KCNE4	Q8WWG9	221 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	ALG3	Q92685	438 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	GLYATL1	Q969I3	302 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	SH3KBP1	Q96B97	665 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	CRELD1	Q96HD1	420 aa		6.84	□□□□□ -1.31
SF3B3-209	ENST00000567635	OXNAD1	Q96HP4	312 aa	Predicted RBP	6.84	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms