RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 RAPGEF5Q92565 580 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 SCAMP4Q969E2 229 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 CHP1Q99653 195 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 DPYSL5Q9BPU6 564 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 RIOK2Q9BVS4 552 aaKnown RBP10.3□□□□□ -0.76
LINC00564-201ENST00000567258 TRIM5Q9C035 493 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 FAM83DQ9H4H8 585 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 CPNE5Q9HCH3 593 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 SPATS2LQ9NUQ6 558 aaKnown RBP10.3□□□□□ -0.76
LINC00564-201ENST00000567258 PISDQ9UG56 409 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 INTUQ9ULD6 942 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 ATXN7L1Q9ULK2 861 aaPredicted RBP10.3□□□□□ -0.76
LINC00564-201ENST00000567258 TMEM98Q9Y2Y6 226 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 LOXL2Q9Y4K0 774 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 PCDHB11Q9Y5F2 797 aa10.3□□□□□ -0.76
LINC00564-201ENST00000567258 A0A0U1RQS6 177 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 RGSL1A5PLK6 1076 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 ERVH48-1M5A8F1 160 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 AGRPO00253 132 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 SLC5A2P31639 672 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 STC1P52823 247 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 PDX1P52945 283 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 MAPK10P53779 464 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 OR1D5P58170 312 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 DYNLT1P63172 113 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 IFI35P80217 286 aaPredicted RBP10.29□□□□□ -0.76
LINC00564-201ENST00000567258 NIPAL4Q0D2K0 466 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 SLC10A2Q12908 348 aaPredicted RBP10.29□□□□□ -0.76
LINC00564-201ENST00000567258 SPA17Q15506 151 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 PCSK7Q16549 785 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 ASTE1Q2TB18 679 aaPredicted RBP10.29□□□□□ -0.76
LINC00564-201ENST00000567258 LRRC38Q5VT99 294 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 CHST15Q7LFX5 561 aaPredicted RBP10.29□□□□□ -0.76
LINC00564-201ENST00000567258 KDELC2Q7Z4H8 507 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 CLEC14AQ86T13 490 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 CPNE8Q86YQ8 564 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 ARRDC2Q8TBH0 407 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 LRRN4Q8WUT4 740 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 PRR11Q96HE9 360 aaPredicted RBP10.29□□□□□ -0.76
LINC00564-201ENST00000567258 AGAP3Q96P47 875 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 SRPK1Q96SB4 655 aaKnown RBP10.29□□□□□ -0.76
LINC00564-201ENST00000567258 FERMT1Q9BQL6 677 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 SPATA16Q9BXB7 569 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 GPR63Q9BZJ6 419 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 RMI1Q9H9A7 625 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 ZFYVE1Q9HBF4 777 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 KCNK4Q9NYG8 393 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 VPS18Q9P253 973 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 FKBPLQ9UIM3 349 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.29□□□□□ -0.76
LINC00564-201ENST00000567258 PCDHGA7Q9Y5G6 932 aa10.29□□□□□ -0.76
LINC00564-201ENST00000567258 MGAQ8IWI9 3026 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 A0A0A6YYK5 440 aaPredicted RBP10.28□□□□□ -0.76
LINC00564-201ENST00000567258 NVLO15381 856 aaKnown RBP10.28□□□□□ -0.76
LINC00564-201ENST00000567258 MTA2O94776 668 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 IPO7O95373 1038 aaKnown RBP10.28□□□□□ -0.76
LINC00564-201ENST00000567258 SLC4A1P02730 911 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 ATP1A1P05023 1023 aaKnown RBP10.28□□□□□ -0.76
LINC00564-201ENST00000567258 NR2C2P49116 596 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 SPINT3P49223 89 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 B4GALNT1Q00973 533 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 GALNT3Q14435 633 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 PYCR3Q53H96 274 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 SLC9A4Q6AI14 798 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 USP53Q70EK8 1073 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 TRIM74Q86UV6 250 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 NRROSQ86YC3 692 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 CCDC50Q8IVM0 306 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 PLD5Q8N7P1 536 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 AVL9Q8NBF6 648 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 OR10G6Q8NH81 332 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 P3H4Q92791 437 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 SH3KBP1Q96B97 665 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 LYSMD1Q96S90 227 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 CCNL2Q96S94 520 aaPredicted RBP10.28□□□□□ -0.76
LINC00564-201ENST00000567258 SLC38A3Q99624 504 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 RDH14Q9HBH5 336 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 BAHCC1Q9P281 2608 aa10.28□□□□□ -0.76
LINC00564-201ENST00000567258 TRBV23OR9-2A0A075B6M9 112 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 A0A1W2PNU3 283 aaPredicted RBP10.27□□□□□ -0.77
LINC00564-201ENST00000567258 HGSO14964 777 aaPredicted RBP10.27□□□□□ -0.77
LINC00564-201ENST00000567258 CASC3O15234 703 aaKnown RBP10.27□□□□□ -0.77
LINC00564-201ENST00000567258 MTSS1O43312 755 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 PSTPIP1O43586 416 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 SLC25A14O95258 325 aaPredicted RBP10.27□□□□□ -0.77
LINC00564-201ENST00000567258 PRLP01236 227 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 FUCA1P04066 466 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 LIPCP11150 499 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 HGFP14210 728 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 COMTP21964 271 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 CSTF2P33240 577 aaKnown RBP eCLIP10.27□□□□□ -0.77
LINC00564-201ENST00000567258 CYLC1P35663 651 aaPredicted RBP10.27□□□□□ -0.77
LINC00564-201ENST00000567258 MAGEA1P43355 309 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 GPLD1P80108 840 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 CDK18Q07002 472 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 ZFP36L1Q07352 338 aaKnown RBP10.27□□□□□ -0.77
LINC00564-201ENST00000567258 ZBTB17Q13105 803 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 TRA2AQ13595 282 aaKnown RBP eCLIP10.27□□□□□ -0.77
LINC00564-201ENST00000567258 ZNF569Q5MCW4 686 aa10.27□□□□□ -0.77
LINC00564-201ENST00000567258 CCDC181Q5TID7 509 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms