RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ETFBP38117 255 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 SEPHS1P49903 392 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 LIG3P49916 1009 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 YWHAZP63104 245 aaKnown RBP9.61□□□□□ -0.87
CAPN3-216ENST00000567071 CCZ1BP86790 482 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 CCZ1P86791 482 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-216ENST00000567071 CTBSQ01459 385 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 NFATC2Q13469 925 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 TDRD12Q587J7 1177 aaKnown RBP9.61□□□□□ -0.87
CAPN3-216ENST00000567071 FAM199XQ6PEV8 388 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-216ENST00000567071 WDR59Q6PJI9 974 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 TMEM270Q6UE05 265 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 UBR7Q8N806 425 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 CLEC1AQ8NC01 280 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 SLC37A2Q8TED4 501 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 FAM81BQ96LP2 452 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 GDAP1L1Q96MZ0 367 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 PANX2Q96RD6 677 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 NCAPGQ9BPX3 1015 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 WDR77Q9BQA1 342 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-216ENST00000567071 ACP6Q9NPH0 428 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 OLAHQ9NV23 265 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 ZNHIT6Q9NWK9 470 aaKnown RBP9.61□□□□□ -0.87
CAPN3-216ENST00000567071 MYO6Q9UM54 1294 aa9.61□□□□□ -0.87
CAPN3-216ENST00000567071 RPH3AQ9Y2J0 694 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-216ENST00000567071 MXRA5Q9NR99 2828 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 TRBV23OR9-2A0A075B6M9 112 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 CXorf51AA0A1B0GTR3 108 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 TOX3O15405 576 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-216ENST00000567071 PAGE1O75459 146 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 IGHEP01854 428 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 HOXB1P14653 301 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-216ENST00000567071 FERP16591 822 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 AGAP20933 346 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 ADSLP30566 484 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-216ENST00000567071 TRIM23P36406 574 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 IST1P53990 364 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 CASP6P55212 293 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 SH3BP2P78314 561 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 CDC16Q13042 620 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 MYBPC3Q14896 1274 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 C5orf22Q49AR2 442 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 ALFQ53S48 1182 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 DCAF10Q5QP82 559 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 TAF3Q5VWG9 929 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 MEX3BQ6ZN04 569 aaKnown RBP9.6□□□□□ -0.87
CAPN3-216ENST00000567071 RAB43Q86YS6 212 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 TMEM139Q8IV31 216 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 LRRC8AQ8IWT6 810 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 FAM71AQ8IYT1 594 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 BCORP1Q8N888 145 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 ADAMTS17Q8TE56 1095 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 SLC20A1Q8WUM9 679 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 NINJ1Q92982 152 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 MR1Q95460 341 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 C9orf72Q96LT7 481 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 FCRL4Q96PJ5 515 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 HS3ST6Q96QI5 342 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 CHP1Q99653 195 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 BAG1Q99933 345 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-216ENST00000567071 LGR4Q9BXB1 951 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 DLL4Q9NR61 685 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 SEMA3GQ9NS98 782 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 RARRES3Q9UL19 164 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 HPCAL4Q9UM19 191 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 SUFUQ9UMX1 484 aa9.6□□□□□ -0.87
CAPN3-216ENST00000567071 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.6□□□□□ -0.87
CAPN3-216ENST00000567071 FAM170AA1A519 330 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 SOWAHDA6NJG2 315 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 ZMPSTE24O75844 475 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 RECQL5O94762 991 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-216ENST00000567071 CLDN14O95500 239 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 IGSF6O95976 241 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 SERPING1P05155 500 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 DNAJA1P31689 397 aaKnown RBP9.59□□□□□ -0.87
CAPN3-216ENST00000567071 ADCY8P40145 1251 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 TSFMP43897 325 aaKnown RBP9.59□□□□□ -0.87
CAPN3-216ENST00000567071 ARF5P84085 180 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 OTUD4Q01804 1114 aaKnown RBP9.59□□□□□ -0.87
CAPN3-216ENST00000567071 FOLH1Q04609 750 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 KLHL30Q0D2K2 578 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 Q0VFX4 171 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 NME3Q13232 169 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 CNGA2Q16280 664 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 MEA1Q16626 185 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.59□□□□□ -0.87
CAPN3-216ENST00000567071 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-216ENST00000567071 IRF2BP2Q7Z5L9 587 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 NOP9Q86U38 636 aaKnown RBP9.59□□□□□ -0.87
CAPN3-216ENST00000567071 SLC9B2Q86UD5 537 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 TMEM200AQ86VY9 491 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 SFRP1Q8N474 314 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 AVL9Q8NBF6 648 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 SYN2Q92777 582 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-216ENST00000567071 ARHGEF2Q92974 986 aaKnown RBP9.59□□□□□ -0.87
CAPN3-216ENST00000567071 TRIM44Q96DX7 344 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-216ENST00000567071 FER1L6-AS2Q96M78 137 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 IP6K3Q96PC2 410 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 SLX1AQ9BQ83 275 aa9.59□□□□□ -0.87
CAPN3-216ENST00000567071 HAUS4Q9H6D7 363 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms