RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 TCAF1Q9Y4C2 921 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 SMIM35A0A1B0GVV1 85 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 AP3D1O14617 1153 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 DUSP11O75319 330 aaKnown RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 CCNKO75909 580 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 CCNDBP1O95273 360 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 FGF19O95750 216 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 ANGPTL1O95841 491 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 MT-CO1P00395 513 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 NFICP08651 508 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 USP17L7P0C7H9 530 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 PEPDP12955 493 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 ANXA8P13928 327 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 PBX3P40426 434 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 PIK3CBP42338 1070 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 RPL38P63173 70 aaKnown RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 PRKCZQ05513 592 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 SRSF11Q05519 484 aaKnown RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 CNPY1Q3B7I2 92 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 ARL13AQ5H913 290 aaPredicted RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 LPCAT4Q643R3 524 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 CYP20A1Q6UW02 462 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 USP43Q70EL4 1123 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 NANOGNBQ7Z5D8 188 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 AMIGO2Q86SJ2 522 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 C10orf53Q8N6V4 93 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 NAT8LQ8N9F0 302 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 OR5B17Q8NGF7 314 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 OR5K1Q8NHB7 308 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 SPPL2BQ8TCT7 592 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 AGAP2Q99490 1192 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 SEMA3CQ99985 751 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 KCNN2Q9H2S1 579 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 MRPL39Q9NYK5 338 aaKnown RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 SALL4Q9UJQ4 1053 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 IGKV6D-41A0A0C4DH26 115 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 FAM234BA2RU67 622 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 KERAO60938 352 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 PENKP01210 267 aaPredicted RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 ESR1P03372 595 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 FABP3P05413 133 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 DBTP11182 482 aaKnown RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 NR4A1P22736 598 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 CRATP43155 626 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 DMPKQ09013 629 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 GALNT3Q14435 633 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 RFTN1Q14699 578 aaPredicted RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 STARD3Q14849 445 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNHIT3Q15649 155 aaPredicted RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 DPYSL2Q16555 572 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 ACSBG2Q5FVE4 666 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 XKRXQ6PP77 449 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 ARMC8Q8IUR7 673 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 BEND7Q8N7W2 519 aaPredicted RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 NR4A3Q92570 626 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 YME1L1Q96TA2 773 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 COPS8Q99627 209 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 HNRNPABQ99729 332 aaKnown RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 TBCDQ9BTW9 1192 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 GATA5Q9BWX5 397 aaPredicted RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 RETREG1Q9H6L5 497 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 SEMA3GQ9NS98 782 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 DNAAF2Q9NVR5 837 aaKnown RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 CMTM6Q9NX76 183 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 TAS2R7Q9NYW3 318 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 GMIPQ9P107 970 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 PTGFRNQ9P2B2 879 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 SEC14L4Q9UDX3 406 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 ZMYM5Q9UJ78 669 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 SNX7Q9UNH6 387 aa4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 GPC6Q9Y625 555 aaPredicted RBP4.33□□□□□ -1.72
LPCAT2-208ENST00000566915 C2CD4BA6NLJ0 364 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 FADS2P1A8MWK0 482 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 SLC30A4O14863 429 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 PER2O15055 1255 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 MATN3O15232 486 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 TSC22D2O75157 780 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 USP12O75317 370 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 ERN1O75460 977 aaKnown RBP4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 TSPAN9O75954 239 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNF24P17028 368 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 FGFR3P22607 806 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 GTF2E2P29084 291 aaKnown RBP4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 CDH5P33151 784 aaPredicted RBP4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 FEN1P39748 380 aaKnown RBP4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 MTHFRP42898 656 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 GPD2P43304 727 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 ALDH9A1P49189 494 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 CCNHP51946 323 aaPredicted RBP4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 LIPEQ05469 1076 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 USP4Q13107 963 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 CBX3Q13185 183 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 MOGQ16653 247 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 LY6KQ17RY6 165 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNF829Q3KNS6 432 aaPredicted RBP4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 REP15Q6BDI9 236 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 SULT1C3Q6IMI6 304 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 TAPT1Q6NXT6 567 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 CNSTQ6PJW8 725 aa4.32□□□□□ -1.72
LPCAT2-208ENST00000566915 TRMT11Q7Z4G4 463 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms