RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TMEM9Q9P0T7 183 aa14.84□□□□□ -0.03
RNF40-209ENST00000566703 NFKBIL1Q9UBC1 381 aaPredicted RBP14.84□□□□□ -0.03
RNF40-209ENST00000566703 SSU72P8A0A1W2PR75 194 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 SYCE3A1L190 88 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 RAD1O60671 282 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 TPM3P06753 285 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 TMEM253P0C7T8 217 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 FAM87AP0C7U9 286 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 F3P13726 295 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 MAP4P27816 1152 aaKnown RBP14.83□□□□□ -0.04
RNF40-209ENST00000566703 CASP14P31944 242 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 CD86P42081 329 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 CSRP3P50461 194 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 DCDC1P59894 354 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 SLC14A2Q15849 920 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 ASTE1Q2TB18 679 aaPredicted RBP14.83□□□□□ -0.04
RNF40-209ENST00000566703 SLC9A4Q6AI14 798 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 CEACAM20Q6UY09 585 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 ATG14Q6ZNE5 492 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 PRICKLE2Q7Z3G6 844 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 ZNF761Q86XN6 746 aaPredicted RBP14.83□□□□□ -0.04
RNF40-209ENST00000566703 FAM129CQ86XR2 697 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 CPNE8Q86YQ8 564 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 JPH3Q8WXH2 748 aaPredicted RBP14.83□□□□□ -0.04
RNF40-209ENST00000566703 NCSTNQ92542 709 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 RAPGEF5Q92565 580 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 PMEPA1Q969W9 287 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 XPO4Q9C0E2 1151 aaKnown RBP14.83□□□□□ -0.04
RNF40-209ENST00000566703 BRD8Q9H0E9 1235 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 SLC25A18Q9H1K4 315 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 IFNKQ9P0W0 207 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 ATXN10Q9UBB4 475 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 PRKAB1Q9Y478 270 aa14.83□□□□□ -0.04
RNF40-209ENST00000566703 PCYT1BQ9Y5K3 369 aaPredicted RBP14.83□□□□□ -0.04
RNF40-209ENST00000566703 HELZ2Q9BYK8 2649 aaKnown RBP14.82□□□□□ -0.04
RNF40-209ENST00000566703 ZNF462Q96JM2 2506 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 KCNK1O00180 336 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 SUV39H1O43463 412 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 PPFIA2O75334 1257 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 SLC25A14O95258 325 aaPredicted RBP14.82□□□□□ -0.04
RNF40-209ENST00000566703 ACP5P13686 325 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 ZFXP17010 805 aaPredicted RBP14.82□□□□□ -0.04
RNF40-209ENST00000566703 ARHGAP25P42331 645 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 PPM1FP49593 454 aaPredicted RBP14.82□□□□□ -0.04
RNF40-209ENST00000566703 CYP4F2P78329 520 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 NFATC2Q13469 925 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 ANKS6Q68DC2 871 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 TMC3Q7Z5M5 1100 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 NT5DC3Q86UY8 548 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 PLXDC1Q8IUK5 500 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 PHYKPLQ8IUZ5 450 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 TRAM1L1Q8N609 369 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 PLD5Q8N7P1 536 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 OR8K1Q8NGG5 319 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 TADA1Q96BN2 335 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 EID2BQ96D98 161 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 RTP4Q96DX8 246 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 IMP4Q96G21 291 aaKnown RBP14.82□□□□□ -0.04
RNF40-209ENST00000566703 SLC45A3Q96JT2 553 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 TRIB3Q96RU7 358 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 ZSCAN5AQ9BUG6 496 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 MAK16Q9BXY0 300 aaKnown RBP14.82□□□□□ -0.04
RNF40-209ENST00000566703 ZMYND15Q9H091 742 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 SLC25A51Q9H1U9 297 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 TRIT1Q9H3H1 467 aaKnown RBP14.82□□□□□ -0.04
RNF40-209ENST00000566703 CPNE7Q9UBL6 633 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 IL17BQ9UHF5 180 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 TUBD1Q9UJT1 453 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 PILRAQ9UKJ1 303 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 KCNK6Q9Y257 313 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 ADGRG1Q9Y653 693 aa14.82□□□□□ -0.04
RNF40-209ENST00000566703 LILRA5A6NI73 299 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 ZNF891A8MT65 544 aaPredicted RBP14.81□□□□□ -0.04
RNF40-209ENST00000566703 CHUKO15111 745 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 SNX2O60749 519 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 LIFP15018 202 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 ZNF8P17098 575 aaPredicted RBP14.81□□□□□ -0.04
RNF40-209ENST00000566703 XRCC1P18887 633 aaPredicted RBP14.81□□□□□ -0.04
RNF40-209ENST00000566703 ZBTB17Q13105 803 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 MESDQ14696 234 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 CLCA4Q14CN2 919 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 PDK1Q15118 436 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 LRRC38Q5VT99 294 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 CCDC70Q6NSX1 233 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 BORAQ6PGQ7 559 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 NLGN4XQ8N0W4 816 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 NLGN4YQ8NFZ3 816 aaPredicted RBP14.81□□□□□ -0.04
RNF40-209ENST00000566703 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.81□□□□□ -0.04
RNF40-209ENST00000566703 LRRN4Q8WUT4 740 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 GLYATL1Q969I3 302 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 SPATA16Q9BXB7 569 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 PACSIN1Q9BY11 444 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 ZNHIT6Q9NWK9 470 aaKnown RBP14.81□□□□□ -0.04
RNF40-209ENST00000566703 TMEM184BQ9Y519 407 aaPredicted RBP14.81□□□□□ -0.04
RNF40-209ENST00000566703 HEY1Q9Y5J3 304 aa14.81□□□□□ -0.04
RNF40-209ENST00000566703 GCN1Q92616 2671 aaKnown RBP14.81□□□□□ -0.04
RNF40-209ENST00000566703 LRRD1A4D1F6 860 aa14.8□□□□□ -0.04
RNF40-209ENST00000566703 C3orf70A6NLC5 250 aaPredicted RBP14.8□□□□□ -0.04
RNF40-209ENST00000566703 A8MU76 341 aa14.8□□□□□ -0.04
RNF40-209ENST00000566703 TERTO14746 1132 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms