RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ANKMY2Q8IV38 441 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 ZBED8Q8IZ13 594 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 SLC22A18ASQ8N1D0 253 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 FBXO36Q8NEA4 188 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 CEP76Q8TAP6 659 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 DTX3LQ8TDB6 740 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 UBXN4Q92575 508 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.39□□□□□ -0.59
KARS-207ENST00000566560 SKA1Q96BD8 255 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 CFAP36Q96G28 342 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 KLHDC7BQ96G42 594 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 CDKN2AIPNLQ96HQ2 116 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 BMFQ96LC9 184 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 TBATAQ96M53 351 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 EBNA1BP2Q99848 306 aaKnown RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 NAT9Q9BTE0 207 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 TEX101Q9BY14 249 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 ASB8Q9H765 288 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 SUDS3Q9H7L9 328 aaPredicted RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 SAYSD1Q9NPB0 183 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 GPR27Q9NS67 375 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 SMOXQ9NWM0 555 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 MAP10Q9P2G4 905 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 ZC3H7BQ9UGR2 993 aaKnown RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.39□□□□□ -0.59
KARS-207ENST00000566560 CRLS1Q9UJA2 301 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 SLC30A1Q9Y6M5 507 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 V9GYY5 206 aaPredicted RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 ADAMTS9Q9P2N4 1935 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 A0A1B0GVT2 93 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 MAGEB16A2A368 324 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 CCDC162PA2VCL2 907 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 OR51F1A6NGY5 319 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 PATE3B3GLJ2 98 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 VILLO15195 856 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 TTC4O95801 387 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 GOT2P00505 430 aaKnown RBP11.38□□□□□ -0.59
KARS-207ENST00000566560 POLBP06746 335 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 PSMA3P25788 255 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 HTR1BP28222 390 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 ECHS1P30084 290 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 FOXN2P32314 431 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 TRIM23P36406 574 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 CARSP49589 748 aaKnown RBP11.38□□□□□ -0.59
KARS-207ENST00000566560 NXPH1P58417 271 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 YPEL5P62699 121 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 CACNG1Q06432 222 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 NFATC2Q13469 925 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 ANKRD20A4Q4UJ75 823 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 TPRG1LQ5T0D9 272 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 DOK6Q6PKX4 331 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 MACC1Q6ZN28 852 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 CEP128Q6ZU80 1094 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 SNX20Q7Z614 316 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 TMEM135Q86UB9 458 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 CCNJLQ8IV13 435 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 IGDCC3Q8IVU1 814 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 OTUD6BQ8N6M0 293 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.38□□□□□ -0.59
KARS-207ENST00000566560 OR6P1Q8NGX9 317 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 RUBCNQ92622 972 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 GLYATL1Q969I3 302 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 HDAC10Q969S8 669 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 FUBP1Q96AE4 644 aaKnown RBP11.38□□□□□ -0.59
KARS-207ENST00000566560 ULK4Q96C45 1275 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 HIC2Q96JB3 615 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 VPS35Q96QK1 796 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 APOOQ9BUR5 198 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 LGR4Q9BXB1 951 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 SMOC1Q9H4F8 434 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 ANKZF1Q9H8Y5 726 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 PRM3Q9NNZ6 103 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 NFU1Q9UMS0 254 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 TEX264Q9Y6I9 313 aa11.38□□□□□ -0.59
KARS-207ENST00000566560 EP300Q09472 2414 aaPredicted RBP11.37□□□□□ -0.59
KARS-207ENST00000566560 ZCWPW2A0A1B0GU75 182 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 PROB1E7EW31 1015 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 TLR4O00206 839 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 UGT1A9O60656 530 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 SLC25A14O95258 325 aaPredicted RBP11.37□□□□□ -0.59
KARS-207ENST00000566560 VAPBO95292 243 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 UGT1A6P19224 532 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 UGT1A1P22309 533 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 UGT1A4P22310 534 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 KELP23276 732 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 ARNTP27540 789 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 TNFRSF8P28908 595 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 AKT1P31749 480 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 UGT1A3P35503 534 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 UGT1A5P35504 534 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 GRIK2Q13002 908 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 PTK2BQ14289 1009 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 LONRF1Q17RB8 773 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 KIF19Q2TAC6 998 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 AARS2Q5JTZ9 985 aaKnown RBP11.37□□□□□ -0.59
KARS-207ENST00000566560 SPANXN3Q5MJ09 141 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 PLA2G2CQ5R387 149 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 GPRC6AQ5T6X5 926 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 TCEAL6Q6IPX3 200 aa11.37□□□□□ -0.59
KARS-207ENST00000566560 PSAPL1Q6NUJ1 521 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms