RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 GPR143P51810 404 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ACTR1AP61163 376 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ELP6Q0PNE2 266 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 MFSD13AQ14CX5 517 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 HSPB2Q16082 182 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 SGCBQ16585 318 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CYP2A13Q16696 494 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 SHROOM1Q2M3G4 852 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 TCTN1Q2MV58 587 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 VWC2Q2TAL6 325 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ANXA2RQ3ZCQ2 193 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 SPDYE7PQ495Y7 208 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 IQCCQ4KMZ1 466 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 FAM98BQ52LJ0 330 aaKnown RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 C6orf136Q5SQH8 315 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 TEDDM1Q5T9Z0 273 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 RNASEH2BQ5TBB1 312 aaKnown RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 PRAMEF8Q5VWM4 474 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 B3GNTL1Q67FW5 361 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 C15orf39Q6ZRI6 1047 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ARMCX2Q7L311 632 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 DET1Q7L5Y6 550 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ABI3BPQ7Z7G0 1075 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ADIPOR2Q86V24 386 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF761Q86XN6 746 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 RASAL3Q86YV0 1011 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF595Q8IYB9 648 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CADM3Q8N126 398 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 KDM8Q8N371 416 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 FBXW8Q8N3Y1 598 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 BANPQ8N9N5 519 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CCNYQ8ND76 341 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 OR52E1Q8NGJ3 308 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 OR10S1Q8NGN2 331 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 HUS1BQ8NHY5 278 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 KIAA1524Q8TCG1 905 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ADAMTS17Q8TE56 1095 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 THRSPQ92748 146 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 KAT2AQ92830 837 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 RAB7BQ96AH8 199 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 NACC2Q96BF6 587 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 MSI2Q96DH6 328 aaKnown RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 SPACA9Q96E40 222 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CHFRQ96EP1 664 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CDCA5Q96FF9 252 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 HARBI1Q96MB7 349 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF560Q96MR9 790 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 LMF1Q96S06 567 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 EGFL8Q99944 293 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 SLX1AQ9BQ83 275 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 MXRA8Q9BRK3 442 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 TCHPQ9BT92 498 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 THUMPD2Q9BTF0 503 aaKnown RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ABHD6Q9BV23 337 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF747Q9BV97 191 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 GTPBP2Q9BX10 602 aaKnown RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CARD6Q9BX69 1037 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ISCUQ9H1K1 167 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 P2RY12Q9H244 342 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 TBC1D17Q9HA65 648 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CHMP1AQ9HD42 196 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 PALMDQ9NP74 551 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 SOHLH2Q9NX45 425 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 LARSQ9P2J5 1176 aaKnown RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 POLLQ9UGP5 575 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 LEF1Q9UJU2 399 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 SNX7Q9UNH6 387 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 SLC8A2Q9UPR5 921 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 ITM2BQ9Y287 266 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 WDR37Q9Y2I8 494 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 UTYO14607 1347 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 CLSPNQ9HAW4 1339 aa3.33□□□□□ -1.88
HERPUD1-211ENST00000566550 A0A087WV48 116 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 DENND3A2RUS2 1198 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 DDTLA6NHG4 134 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TRIM77I1YAP6 450 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 SGK1O00141 431 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 PES1O00541 588 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 VCYO14598 125 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 SELENOFO60613 162 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 SCAF4O95104 1147 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 ADCY5O95622 1261 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 GH1P01241 217 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 HLA-DQA2P01906 255 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 HIST1H2ABP04908 130 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 HSPA5P11021 654 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TOP1P11387 765 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 PCNAP12004 261 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 HIST1H2ADP20671 130 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 TMOD1P28289 359 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 CCND3P30281 292 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 SHMT1P34896 483 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 PITPNBP48739 271 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 VAV2P52735 878 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 UCP2P55851 309 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 EEFSECP57772 596 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 PTENP60484 403 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 ADORA2A-AS1P86434 159 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 RHAGQ02094 409 aa3.32□□□□□ -1.88
HERPUD1-211ENST00000566550 GCNT1Q02742 428 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms