RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SCN8AQ9UQD0 1980 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 A0A1W2PQM1 296 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 MACROD2A1Z1Q3 448 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 KMOO15229 486 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 GRID2O43424 1007 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 NRDCO43847 1150 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 PMPCBO75439 489 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 MT-CYBP00156 380 aaPredicted RBP16.57■□□□□ 0.24
USB1-211ENST00000565662 WNT3AP56704 352 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 IHHQ14623 411 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 TCEA2Q15560 299 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 PEX26Q7Z412 305 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 GLT6D1Q7Z4J2 308 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 LRRTM4Q86VH4 590 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 RBM12BQ8IXT5 1001 aaKnown RBP16.57■□□□□ 0.24
USB1-211ENST00000565662 NAGSQ8N159 534 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 ZNF567Q8N184 647 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 SFRP1Q8N474 314 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 RNF10Q8N5U6 811 aaKnown RBP16.57■□□□□ 0.24
USB1-211ENST00000565662 OR4D9Q8NGE8 314 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 OR10G6Q8NH81 332 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 CCL4L1Q8NHW4 92 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 AHCYL2Q96HN2 611 aaKnown RBP16.57■□□□□ 0.24
USB1-211ENST00000565662 ZNF514Q96K75 400 aaPredicted RBP16.57■□□□□ 0.24
USB1-211ENST00000565662 TTC25Q96NG3 672 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 ZMYND15Q9H091 742 aa16.57■□□□□ 0.24
USB1-211ENST00000565662 SUDS3Q9H7L9 328 aaPredicted RBP16.57■□□□□ 0.24
USB1-211ENST00000565662 CFAP47Q6ZTR5 3102 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 ZFHX4Q86UP3 3567 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 UNC13CQ8NB66 2214 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 C2orf81A6NN90 581 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 FADS2P1A8MWK0 482 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 TK2O00142 265 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 NVLO15381 856 aaKnown RBP16.56■□□□□ 0.24
USB1-211ENST00000565662 TNFSF15O95150 251 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 PYGMP11217 842 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 F3P13726 295 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 AK4P27144 223 aaPredicted RBP16.56■□□□□ 0.24
USB1-211ENST00000565662 SPAM1P38567 509 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 POLD2P49005 469 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 B4GALNT1Q00973 533 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 HHEXQ03014 270 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 TLE3Q04726 772 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 SLC1A5Q15758 541 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 LDLRAP1Q5SW96 308 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 KCTD16Q68DU8 428 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 KDELC1Q6UW63 502 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 MARK2Q7KZI7 788 aaKnown RBP16.56■□□□□ 0.24
USB1-211ENST00000565662 CHST15Q7LFX5 561 aaPredicted RBP16.56■□□□□ 0.24
USB1-211ENST00000565662 SPACA3Q8IXA5 215 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 Q8N9G6 341 aaPredicted RBP16.56■□□□□ 0.24
USB1-211ENST00000565662 SPATA22Q8NHS9 363 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 WDR24Q96S15 920 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 SLC38A3Q99624 504 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 FRMD8P1Q9BZ68 369 aaPredicted RBP16.56■□□□□ 0.24
USB1-211ENST00000565662 CAAP1Q9H8G2 361 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 UCK1Q9HA47 277 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 KCNK4Q9NYG8 393 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 RABGEF1Q9UJ41 708 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 SHOC2Q9UQ13 582 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 TMEM98Q9Y2Y6 226 aa16.56■□□□□ 0.24
USB1-211ENST00000565662 EIF4E1BA6NMX2 242 aaKnown RBP16.55■□□□□ 0.24
USB1-211ENST00000565662 CHUKO15111 745 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 KRT86O43790 486 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 FUCA1P04066 466 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 RBP3P10745 1247 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 ALDH4A1P30038 563 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 CD68P34810 354 aaPredicted RBP16.55■□□□□ 0.24
USB1-211ENST00000565662 UGT1A5P35504 534 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 MAZP56270 477 aaKnown RBP16.55■□□□□ 0.24
USB1-211ENST00000565662 EIF3EP60228 445 aaKnown RBP16.55■□□□□ 0.24
USB1-211ENST00000565662 OTUD4Q01804 1114 aaKnown RBP16.55■□□□□ 0.24
USB1-211ENST00000565662 CCDC173Q0VFZ6 552 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 INSCQ1MX18 579 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 CYB5D1Q6P9G0 228 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 C19orf48Q6RUI8 117 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 GPR155Q7Z3F1 870 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 TRIM74Q86UV6 250 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 SLITRK4Q8IW52 837 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 LRRC57Q8N9N7 239 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 ACTL9Q8TC94 416 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 LRRN4Q8WUT4 740 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 KRT35Q92764 455 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 FCRL3Q96P31 734 aaPredicted RBP16.55■□□□□ 0.24
USB1-211ENST00000565662 AGAP2Q99490 1192 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 GOLPH3Q9H4A6 298 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 SMOXQ9NWM0 555 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 SAE1Q9UBE0 346 aaPredicted RBP16.55■□□□□ 0.24
USB1-211ENST00000565662 CNOT6Q9ULM6 557 aaKnown RBP16.55■□□□□ 0.24
USB1-211ENST00000565662 LOXL2Q9Y4K0 774 aa16.55■□□□□ 0.24
USB1-211ENST00000565662 DNMT3AQ9Y6K1 912 aaPredicted RBP16.55■□□□□ 0.24
USB1-211ENST00000565662 C5orf60A6NFR6 353 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 LILRA5A6NI73 299 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 CRTAMO95727 393 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 SLC4A1P02730 911 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 BPIP17213 487 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 HADHAP40939 763 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 MARCKSL1P49006 195 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 LIMK2P53671 638 aa16.54■□□□□ 0.24
USB1-211ENST00000565662 RAB15P59190 212 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms