RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 SMPD3Q9NY59 655 aaPredicted RBP7.22□□□□□ -1.25
SMG1-210ENST00000565224 TAS2R13Q9NYV9 303 aa7.22□□□□□ -1.25
SMG1-210ENST00000565224 EBF1Q9UH73 591 aa7.22□□□□□ -1.25
SMG1-210ENST00000565224 LEF1Q9UJU2 399 aaPredicted RBP7.22□□□□□ -1.25
SMG1-210ENST00000565224 ANAPC2Q9UJX6 822 aa7.22□□□□□ -1.25
SMG1-210ENST00000565224 IKZF3Q9UKT9 509 aa7.22□□□□□ -1.25
SMG1-210ENST00000565224 FAF1Q9UNN5 650 aaPredicted RBP7.22□□□□□ -1.25
SMG1-210ENST00000565224 OAS3Q9Y6K5 1087 aaKnown RBP7.22□□□□□ -1.25
SMG1-210ENST00000565224 PTPRDP23468 1912 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 UBA6A0AVT1 1052 aaPredicted RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 ASPDHA6ND91 283 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 CCDC154A6NI56 674 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 STX16O14662 325 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 PRAMEF11O60813 436 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 SLC22A3O75751 556 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 CELF2O95319 508 aaKnown RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 PIRTP0C851 137 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 AKR1A1P14550 325 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 ACVRL1P37023 503 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 THPOP40225 353 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 APLP1P51693 650 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 YBEYP58557 167 aaPredicted RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 TSNQ15631 228 aaKnown RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 PDCD4Q53EL6 469 aaKnown RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 XKR7Q5GH72 579 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 GNASQ5JWF2 1037 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 PAQR3Q6TCH7 311 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 CXCL17Q6UXB2 119 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 PATL1Q86TB9 770 aaKnown RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 NLRC5Q86WI3 1866 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 CIR1Q86X95 450 aaPredicted RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 CROCCP3Q8IVE0 287 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 COLGALT2Q8IYK4 626 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 DHRSXQ8N5I4 330 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 PAPD5Q8NDF8 572 aaKnown RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 OSCP1Q8WVF1 389 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 C12orf43Q96C57 262 aaKnown RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 CDKN2AIPNLQ96HQ2 116 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 FUBP3Q96I24 572 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMG1-210ENST00000565224 C8orf48Q96LL4 319 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 TEX37Q96LM6 180 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 RPRD1AQ96P16 312 aaPredicted RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 ZIC5Q96T25 663 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 NPLQ9BXD5 320 aaPredicted RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 SEZ6LQ9BYH1 1024 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 BRINP2Q9C0B6 783 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 CCDC68Q9H2F9 335 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 HIPK3Q9H422 1215 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 PLGRKTQ9HBL7 147 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 FAM50BQ9Y247 325 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 MED16Q9Y2X0 877 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 TIMM22Q9Y584 194 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 FADS3Q9Y5Q0 445 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 HEMK1Q9Y5R4 338 aaPredicted RBP7.21□□□□□ -1.26
SMG1-210ENST00000565224 TANC1Q9C0D5 1861 aa7.21□□□□□ -1.26
SMG1-210ENST00000565224 NPEPPSL1A6NEC2 478 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 CDC7O00311 574 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 SNX2O60749 519 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 DUSP11O75319 330 aaKnown RBP7.2□□□□□ -1.26
SMG1-210ENST00000565224 SOAT2O75908 522 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 ESRRBO95718 433 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 NDST3O95803 873 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 MLYCDO95822 493 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 CLIC3O95833 236 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 TBX18O95935 607 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 LDLRP01130 860 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 RPLP2P05387 115 aaKnown RBP7.2□□□□□ -1.26
SMG1-210ENST00000565224 SERPINF2P08697 491 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 PRSS56P0CW18 603 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 UROSP10746 265 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 NCK1P16333 377 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 VARSP26640 1264 aaKnown RBP7.2□□□□□ -1.26
SMG1-210ENST00000565224 OR1E1P30953 314 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 FMO4P31512 558 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 TTKP33981 857 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 RPS9P46781 194 aaKnown RBP7.2□□□□□ -1.26
SMG1-210ENST00000565224 STT3AP46977 705 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 ZFP36L2P47974 494 aaKnown RBP7.2□□□□□ -1.26
SMG1-210ENST00000565224 MAPKAPK2P49137 400 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 UFM1P61960 85 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 ECT2LQ008S8 904 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 CTBSQ01459 385 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 TMED1Q13445 227 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 NFE2Q16621 373 aaPredicted RBP7.2□□□□□ -1.26
SMG1-210ENST00000565224 FUT11Q495W5 492 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 SETMARQ53H47 684 aaPredicted RBP7.2□□□□□ -1.26
SMG1-210ENST00000565224 CYBRD1Q53TN4 286 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 FBXO48Q5FWF7 155 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 PAGE3Q5JUK9 113 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 KLHL35Q6PF15 583 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 TXNDC11Q6PKC3 985 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 AFTPHQ6ULP2 937 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 SYVN1Q86TM6 617 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 SAPCD2Q86UD0 394 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 MIB1Q86YT6 1006 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 KIAA2013Q8IYS2 634 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 TMEM199Q8N511 208 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 TERB1Q8NA31 727 aa7.2□□□□□ -1.26
SMG1-210ENST00000565224 ZNF420Q8TAQ5 688 aaPredicted RBP7.2□□□□□ -1.26
SMG1-210ENST00000565224 FNDC8Q8TC99 324 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms