RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 CCDC112Q8NEF3 446 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 LPCAT1Q8NF37 534 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 OR10G6Q8NH81 332 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 NCSTNQ92542 709 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 TADA1Q96BN2 335 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 RTP4Q96DX8 246 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 AHCYL2Q96HN2 611 aaKnown RBP8.49□□□□□ -1.05
CAPN3-213ENST00000565173 RNF157Q96PX1 679 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 CTRCQ99895 268 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 MLPHQ9BV36 600 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-213ENST00000565173 TRIM4Q9C037 500 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 SLC25A18Q9H1K4 315 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 CARD9Q9H257 536 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 RMI1Q9H9A7 625 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 APMAPQ9HDC9 416 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 ARFGAP3Q9NP61 516 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 FBXO8Q9NRD0 319 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 PKD2L2Q9NZM6 624 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 ATXN10Q9UBB4 475 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 SLC23A2Q9UGH3 650 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 KCNK6Q9Y257 313 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 LUC7L2Q9Y383 392 aaKnown RBP8.49□□□□□ -1.05
CAPN3-213ENST00000565173 TTLL3Q9Y4R7 772 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 HEMK1Q9Y5R4 338 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-213ENST00000565173 SPTA1P02549 2419 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 LOC101059948A0A1B0GTJ6 334 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 PRR19A6NJB7 356 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 NKX2-8O15522 239 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 KRT7P08729 469 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 ACP5P13686 325 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 CA4P22748 312 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 MAP4P27816 1152 aaKnown RBP8.48□□□□□ -1.05
CAPN3-213ENST00000565173 CASP14P31944 242 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 MAN1A1P33908 653 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 CLCNKAP51800 687 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 EPHA4P54764 986 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 UBE2IP63279 158 aaKnown RBP8.48□□□□□ -1.05
CAPN3-213ENST00000565173 GALNT3Q14435 633 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 SNAP47Q5SQN1 464 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 ZNF648Q5T619 568 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-213ENST00000565173 ATG14Q6ZNE5 492 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 TMC3Q7Z5M5 1100 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 FAM129CQ86XR2 697 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 MAP7D3Q8IWC1 876 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 CCNYQ8ND76 341 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 GPR26Q8NDV2 337 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 SH3KBP1Q96B97 665 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 IQCDQ96DY2 449 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 IMP4Q96G21 291 aaKnown RBP8.48□□□□□ -1.05
CAPN3-213ENST00000565173 SLC45A3Q96JT2 553 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 PLEKHG4BQ96PX9 1271 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 TEFMQ96QE5 360 aaKnown RBP8.48□□□□□ -1.05
CAPN3-213ENST00000565173 HERPUD2Q9BSE4 406 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 TBC1D10AQ9BXI6 508 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 BRD8Q9H0E9 1235 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 ADNPQ9H2P0 1102 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 ZFYVE1Q9HBF4 777 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 TRIM39Q9HCM9 518 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 PRDM8Q9NQV8 689 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 OGFRQ9NZT2 677 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 IFNKQ9P0W0 207 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 SCHIP1Q9P0W5 487 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-213ENST00000565173 CTTNBP2NLQ9P2B4 639 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 UVRAGQ9P2Y5 699 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 CPNE7Q9UBL6 633 aa8.48□□□□□ -1.05
CAPN3-213ENST00000565173 TMEM184BQ9Y519 407 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-213ENST00000565173 KIR2DS5A0A0G2JLQ3 304 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 A0A0G2JNG1 304 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 SYCE3A1L190 88 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 OR5K4A6NMS3 321 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 ZNF487B1APH4 448 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 KIR2DS3K7RE56 304 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 CHUKO15111 745 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 CAPN5O15484 640 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-213ENST00000565173 ARHGAP6O43182 974 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 SNX2O60749 519 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 PPFIA2O75334 1257 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 STK17BO94768 372 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 SLC25A14O95258 325 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-213ENST00000565173 DLGAP3O95886 979 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 H2AFZP0C0S5 128 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 PIRTP0C851 137 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 XRCC1P18887 633 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-213ENST00000565173 PTMSP20962 102 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 POLE2P56282 527 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 KCNAB2Q13303 367 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 KIR2DS5Q14953 304 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 SLC18A3Q16572 532 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 KHDC1Q4VXA5 237 aaKnown RBP8.47□□□□□ -1.05
CAPN3-213ENST00000565173 SLC9A4Q6AI14 798 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 CEACAM20Q6UY09 585 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 H2AFVQ71UI9 128 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 KDELC2Q7Z4H8 507 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 ADGRG6Q86SQ4 1221 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 SLC9B2Q86UD5 537 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 ZNF547Q8IVP9 402 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 UNC5BQ8IZJ1 945 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 NLGN4XQ8N0W4 816 aa8.47□□□□□ -1.05
CAPN3-213ENST00000565173 NLGN4YQ8NFZ3 816 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-213ENST00000565173 CCHCR1Q8TD31 782 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms