RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ABI3Q9P2A4 366 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 MAGED1Q9Y5V3 778 aaPredicted RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 L1CAMP32004 1257 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 SLC18A1P54219 525 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 DSC2Q02487 901 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PPIDQ08752 370 aaKnown RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 ZNF169Q14929 603 aaPredicted RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 PLCL1Q15111 1095 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 ATP13A5Q4VNC0 1218 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 C10orf120Q5SQS8 335 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 ARCQ7LC44 396 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 GALNT12Q8IXK2 581 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 HS6ST3Q8IZP7 471 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 RNF38Q9H0F5 515 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 NT5MQ9NPB1 228 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 ARL8BQ9NVJ2 186 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PCDHGB2Q9Y5G2 931 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 FAM47DPA6NHR8 397 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 CCL16O15467 120 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 HAUS5O94927 633 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 GUCA1CO95843 209 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PET100P0DJ07 73 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 ARRB2P32121 409 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PTK7Q13308 1070 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 GRHL2Q6ISB3 625 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 SH2D5Q6ZV89 423 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 STRA8Q7Z7C7 330 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 OR7D4Q8NG98 312 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 DOK4Q8TEW6 326 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 GDPD5Q8WTR4 605 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 ART4Q93070 314 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 TMEM169Q96HH4 297 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 SLC6A17Q9H1V8 727 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 IL1RAPQ9NPH3 570 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PDP2Q9P2J9 529 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 WBP11Q9Y2W2 641 aaKnown RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 NOP16Q9Y3C1 178 aaKnown RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 ASB3Q9Y575 518 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 CFAP20Q9Y6A4 193 aaKnown RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 A0A1W2PQ45 241 aaPredicted RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 A0A1W2PQY0 241 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 IRAK2O43187 625 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 C7P10643 843 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 SLC10A7Q0GE19 358 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 SSX1Q16384 188 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 ATXN7L2Q5T6C5 722 aaPredicted RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 TXNDC8Q6A555 127 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 C17orf99Q6UX52 265 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 TOR1AIP2Q8NFQ8 470 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 ZNF75CPQ92670 426 aaPredicted RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 MOAP1Q96BY2 351 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 TUBGCP3Q96CW5 907 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 SPACA7Q96KW9 195 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 CSPG4P5Q96PW8 444 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 RABGEF1Q9UJ41 708 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 PHTF1Q9UMS5 762 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 ARID2Q68CP9 1835 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 TRIM49D1C9J1S8 452 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 FFAR2O15552 330 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 ATG12O94817 140 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 LTFP02788 710 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 EN2P19622 333 aaPredicted RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 VARSP26640 1264 aaKnown RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 CD68P34810 354 aaPredicted RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 ACADVLP49748 655 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 SP3Q02447 781 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 MZT1Q08AG7 82 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 DEFB115Q30KQ5 88 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 PLEKHA7Q6IQ23 1121 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 CDC73Q6P1J9 531 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 UBE2Q1Q7Z7E8 422 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 TAC4Q86UU9 113 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 CAND1Q86VP6 1230 aaKnown RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 DEDD2Q8WXF8 326 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 ATP13A1Q9HD20 1204 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 EHD3Q9NZN3 535 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 CXXC1Q9P0U4 656 aaPredicted RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 KIF17Q9P2E2 1029 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 ATXN10Q9UBB4 475 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 FCF1Q9Y324 198 aaKnown RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 SHROOM3Q8TF72 1996 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 CBX4O00257 560 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 CDK2AP1O14519 115 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 CFLARO15519 480 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 OR1I1O60431 355 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 SIX3O95343 332 aaPredicted RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 PSKH1P11801 424 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 FKBP2P26885 142 aaKnown RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 HALP42357 657 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 SLC11A2P49281 568 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 YWHAHQ04917 246 aaPredicted RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 LGALS3BPQ08380 585 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 TBC1D25Q3MII6 688 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 TCEAL5Q5H9L2 206 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 RBM20Q5T481 1227 aaKnown RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 HMGN2P46Q86SG4 172 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 CPNE9Q8IYJ1 553 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 FBXO22Q8NEZ5 403 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 IPCEF1Q8WWN9 437 aaPredicted RBP3.34□□□□□ -1.88
CHD9-213ENST00000564845 RNF157Q96PX1 679 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms