RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SMIM14Q96QK8 99 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 ZPBPQ9BS86 351 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 UCK1Q9HA47 277 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 ABHD10Q9NUJ1 306 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 PLEKHM1Q9Y4G2 1056 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 ZNF462Q96JM2 2506 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 CAPN5O15484 640 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 MTSS1O43312 755 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 GRID2O43424 1007 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 SLC25A14O95258 325 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 EPOP01588 193 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 ATP1A1P05023 1023 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 FGF3P11487 239 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 CCL4P13236 92 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 PLA2G2AP14555 144 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 HHEXQ03014 270 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 TGIF1Q15583 401 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 DCAF12Q5T6F0 453 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 NKAIN2Q5VXU1 208 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 KIAA1614Q5VZ46 1190 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 ZDHHC20Q5W0Z9 365 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 CHST15Q7LFX5 561 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 TRIM74Q86UV6 250 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 ZFAND4Q86XD8 727 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 TRAM1L1Q8N609 369 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 DTX3LQ8TDB6 740 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 SLC37A2Q8TED4 501 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 TRIB3Q96RU7 358 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 CHP1Q99653 195 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 SPATA16Q9BXB7 569 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 FOXJ2Q9P0K8 574 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 TBC1D29Q9UFV1 150 aa12.06□□□□□ -0.48
GTF3C1-204ENST00000564664 PIEZO2Q9H5I5 2752 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 FADS2P1A8MWK0 482 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 CHUKO15111 745 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 VEGFDO43915 354 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 KCNJ13O60928 360 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 MFAP3LO75121 409 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 NDST3O95803 873 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 F3P13726 295 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 XRCC1P18887 633 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 HADHBP55084 474 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 ZBTB17Q13105 803 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 LY6DQ14210 128 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 TAZQ16635 292 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 ZNF569Q5MCW4 686 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 ARHGAP22Q7Z5H3 698 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 RFX6Q8HWS3 928 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 PHYKPLQ8IUZ5 450 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 RCBTB1Q8NDN9 531 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 LRRN4Q8WUT4 740 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 TEKT5Q96M29 485 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 AGAP3Q96P47 875 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 GPR63Q9BZJ6 419 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 TRABDQ9H4I3 376 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 GLOD4Q9HC38 313 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 FBXO8Q9NRD0 319 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 WDR70Q9NW82 654 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 SLC39A1Q9NY26 324 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 ATXN10Q9UBB4 475 aa12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 OAS3Q9Y6K5 1087 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 ZFC3H1O60293 1989 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-204ENST00000564664 TRBV23OR9-2A0A075B6M9 112 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 A0A0A6YYK5 440 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 A6NCN8 305 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 AKR1B15C9JRZ8 316 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 J3QKU1 62 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 KMOO15229 486 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 PSTPIP1O43586 416 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 KRT1P04264 644 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 ACP5P13686 325 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 ZNF8P17098 575 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 TNNT3P45378 269 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 MC2RQ01718 297 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 GALNT3Q14435 633 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 WASH2PQ6VEQ5 465 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 ADGRG6Q86SQ4 1221 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 PLXDC1Q8IUK5 500 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 RBM12BQ8IXT5 1001 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 BRSK1Q8TDC3 778 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 TFB1MQ8WVM0 346 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 NKD1Q969G9 470 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 GLYATL1Q969I3 302 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 EID2BQ96D98 161 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 CALR3Q96L12 384 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 PLEKHG4BQ96PX9 1271 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 VAT1Q99536 393 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 ARHGAP9Q9BRR9 750 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 EFHD1Q9BUP0 239 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 OR2AG1Q9H205 316 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 TRIT1Q9H3H1 467 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 TSPY26PQ9H489 355 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 WASH6PQ9NQA3 447 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 SPTLC3Q9NUV7 552 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 CPNE7Q9UBL6 633 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 PCDHGA4Q9Y5G9 962 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 ADGRG1Q9Y653 693 aa12.04□□□□□ -0.48
GTF3C1-204ENST00000564664 LOC285095A0A1B0GVY8 99 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms