RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 DHX34Q14147 1143 aaKnown RBP4.65□□□□□ -1.66
LINC00560-201ENST00000564593 PLCB4Q15147 1175 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 RASA2Q15283 850 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 DECR1Q16698 335 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 ATP13A5Q4VNC0 1218 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 KCNT1Q5JUK3 1230 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 KRT79Q5XKE5 535 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 ZNF280DQ6N043 979 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 RGMBQ6NW40 437 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 KRBA2Q6ZNG9 492 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 PELI3Q8N2H9 469 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 MCUQ8NE86 351 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 GSDMBQ8TAX9 411 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 RHBDF1Q96CC6 855 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 CSF3RQ99062 836 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 CMKLR1Q99788 373 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 MARCH4Q9P2E8 410 aaPredicted RBP4.65□□□□□ -1.66
LINC00560-201ENST00000564593 PPIEQ9UNP9 301 aaKnown RBP4.65□□□□□ -1.66
LINC00560-201ENST00000564593 LOXL2Q9Y4K0 774 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 EVPLQ92817 2033 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 CACNA1IQ9P0X4 2223 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 TAF1P21675 1872 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 hCG_1809904A0A1W2PP81 198 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 A0A1W2PPE2 198 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 A0A1W2PR64 198 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 LNP1A1A4G5 178 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 RSL1D1O76021 490 aaKnown RBP4.65□□□□□ -1.67
LINC00560-201ENST00000564593 GAGE7O76087 117 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 CSPG5O95196 566 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 GH2P01242 217 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 PRSS2P07478 247 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 GAGE12FP0CL80 117 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 GAGE12GP0CL81 117 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 GAGE12IP0CL82 117 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 SRCP12931 536 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 APOBEC1P41238 236 aaKnown RBP4.65□□□□□ -1.67
LINC00560-201ENST00000564593 FASLGP48023 281 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 LIG4P49917 911 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 CLCNKAP51800 687 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 BNC1Q01954 994 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 CXCL9Q07325 125 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 GAGE1Q13065 139 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 GAGE4Q13068 117 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 GRAPQ13588 217 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 BAATQ14032 418 aaPredicted RBP4.65□□□□□ -1.67
LINC00560-201ENST00000564593 XKR9Q5GH70 373 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 NRROSQ86YC3 692 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 CHERPQ8IWX8 916 aaKnown RBP4.65□□□□□ -1.67
LINC00560-201ENST00000564593 PGBD5Q8N414 524 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 MINDY1Q8N5J2 469 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 POMGNT2Q8NAT1 580 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 OR2AK2Q8NG84 335 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 HMGCLL1Q8TB92 370 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 FAM216AQ8WUB2 273 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 TAAR8Q969N4 342 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 TMCO6Q96DC7 493 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 MTBPQ96DY7 904 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 SEMA3CQ99985 751 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 MRPL1Q9BYD6 325 aaKnown RBP4.65□□□□□ -1.67
LINC00560-201ENST00000564593 SPRY4Q9C004 299 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 TAB2Q9NYJ8 693 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 DNAJB4Q9UDY4 337 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 PCDHA7Q9UN72 937 aa4.65□□□□□ -1.67
LINC00560-201ENST00000564593 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.65□□□□□ -1.67
LINC00560-201ENST00000564593 GOLGA6L9A6NEM1 432 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 A6NL46 340 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 KCNN4O15554 427 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 PLPP2O43688 288 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 ZNF500O60304 480 aaPredicted RBP4.64□□□□□ -1.67
LINC00560-201ENST00000564593 TPOP07202 933 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 IGHV4-30-4P0DP06 118 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 ITGB8P26012 769 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 TAS2R38P59533 333 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 PPP2R2BQ00005 443 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 SPOCK1Q08629 439 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 AIMP1Q12904 312 aaKnown RBP4.64□□□□□ -1.67
LINC00560-201ENST00000564593 TRAF3Q13114 568 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 KRT33BQ14525 404 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 HLFQ16534 295 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 LCN10Q6JVE6 187 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 RPUSD3Q6P087 351 aaKnown RBP4.64□□□□□ -1.67
LINC00560-201ENST00000564593 PAPD4Q6PIY7 484 aaKnown RBP4.64□□□□□ -1.67
LINC00560-201ENST00000564593 RASGEF1CQ8N431 466 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 MAGEC3Q8TD91 643 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 CAMK1GQ96NX5 476 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 SMC6Q96SB8 1091 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 DDOQ99489 341 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 RTN4RQ9BZR6 473 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 FBXL2Q9UKC9 423 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 KLHL20Q9Y2M5 609 aa4.64□□□□□ -1.67
LINC00560-201ENST00000564593 LOC102723996A0A087X1L8 192 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 IGLV5-52A0A0A0MRZ9 124 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 FAM90A10PA6NDY2 464 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 FAM90A26D6RGX4 464 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 DDNO94850 711 aaPredicted RBP4.63□□□□□ -1.67
LINC00560-201ENST00000564593 PRLRP16471 622 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 UGT1A1P22309 533 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 UBXN2AP68543 259 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 OASLQ15646 514 aaKnown RBP4.63□□□□□ -1.67
LINC00560-201ENST00000564593 MYLK3Q32MK0 819 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms