RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 SPINT3P49223 89 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 MMRN1Q13201 1228 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 IGFBP7Q16270 282 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 DEFB109BQ30KR1 87 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 LACTB2Q53H82 288 aaPredicted RBP13.94□□□□□ -0.18
CDR2-204ENST00000564542 NCBP2-AS2Q69YL0 99 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 PLXDC1Q8IUK5 500 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDR2-204ENST00000564542 LPCAT1Q8NF37 534 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 ARRDC2Q8TBH0 407 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 WDR24Q96S15 920 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 TBC1D10AQ9BXI6 508 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 CARD9Q9H257 536 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 PCDH9Q9HC56 1237 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 PKD2L2Q9NZM6 624 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 CPNE7Q9UBL6 633 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 IP6K2Q9UHH9 426 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 TTLL3Q9Y4R7 772 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 KCTD3Q9Y597 815 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 RGSL1A5PLK6 1076 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 NUAK1O60285 661 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 HLA-DQB2P05538 268 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 CD48P09326 243 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 SKILP12757 684 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 UBE2IP63279 158 aaKnown RBP13.93□□□□□ -0.18
CDR2-204ENST00000564542 PAFAH1B3Q15102 231 aaKnown RBP13.93□□□□□ -0.18
CDR2-204ENST00000564542 IFI16Q16666 785 aaKnown RBP13.93□□□□□ -0.18
CDR2-204ENST00000564542 FILIP1LQ4L180 1135 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 CCDC122Q5T0U0 273 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 ATP1A1-AS1Q5TC04 95 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 BTBD6Q96KE9 485 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 TSGA13Q96PP4 275 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 ULBP3Q9BZM4 244 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 NAT10Q9H0A0 1025 aaKnown RBP13.93□□□□□ -0.18
CDR2-204ENST00000564542 FAM83DQ9H4H8 585 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 UCK1Q9HA47 277 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 RBM22Q9NW64 420 aaKnown RBP eCLIP13.93□□□□□ -0.181e-9■■□□□ 12
CDR2-204ENST00000564542 ANAPC7Q9UJX3 599 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 RPS6KL1Q9Y6S9 549 aa13.93□□□□□ -0.18
CDR2-204ENST00000564542 NBASA2RRP1 2371 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 PRR19A6NJB7 356 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 GPR89AB7ZAQ6 455 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 GRID2O43424 1007 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 C9P02748 559 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 GPR89BP0CG08 455 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 GP1BBP13224 206 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 CCNCP24863 283 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 ARSEP51690 589 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 CLCNKAP51800 687 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 GFERP55789 205 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 NIPAL4Q0D2K0 466 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 DPYSL3Q14195 570 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 ANKRD20A8PQ5CZ79 823 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 C16orf46Q6P387 395 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 CCHCR1Q8TD31 782 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 C9orf72Q96LT7 481 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 BPIFA3Q9BQP9 254 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 ZNF670Q9BS34 389 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 NUP85Q9BW27 656 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 THAP2Q9H0W7 228 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 PRDM8Q9NQV8 689 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 ATXN10Q9UBB4 475 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 ADGRG1Q9Y653 693 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 MRPS18BQ9Y676 258 aaKnown RBP13.92□□□□□ -0.18
CDR2-204ENST00000564542 KCNMB2Q9Y691 235 aa13.92□□□□□ -0.18
CDR2-204ENST00000564542 USP9YO00507 2555 aaPredicted RBP13.91□□□□□ -0.18
CDR2-204ENST00000564542 ANKRD66B4E2M5 251 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 TOX3O15405 576 aaPredicted RBP13.91□□□□□ -0.18
CDR2-204ENST00000564542 MTA2O94776 668 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 ZNF28P17035 718 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 ZNF8P17098 575 aaPredicted RBP13.91□□□□□ -0.18
CDR2-204ENST00000564542 XRCC1P18887 633 aaPredicted RBP13.91□□□□□ -0.18
CDR2-204ENST00000564542 F8A1P23610 371 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 DLSTP36957 453 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 TYRO3Q06418 890 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 FOXM1Q08050 763 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 KLRB1Q12918 225 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 QPCTQ16769 361 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 HADHQ16836 314 aaKnown RBP13.91□□□□□ -0.18
CDR2-204ENST00000564542 TDRD12Q587J7 1177 aaKnown RBP13.91□□□□□ -0.18
CDR2-204ENST00000564542 ZNF569Q5MCW4 686 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 CCDC183Q5T5S1 534 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 FAM26EQ8N5C1 309 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 PLEKHG4BQ96PX9 1271 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 MLPHQ9BV36 600 aaPredicted RBP13.91□□□□□ -0.18
CDR2-204ENST00000564542 OSGEPL1Q9H4B0 414 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 ZNF768Q9H5H4 540 aaKnown RBP13.91□□□□□ -0.18
CDR2-204ENST00000564542 OGFRQ9NZT2 677 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 TP53TG5Q9Y2B4 290 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 MAN2B2Q9Y2E5 1009 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 PCDHB3Q9Y5E6 796 aa13.91□□□□□ -0.18
CDR2-204ENST00000564542 USP9XQ93008 2570 aaPredicted RBP13.9□□□□□ -0.18
CDR2-204ENST00000564542 UTP20O75691 2785 aaKnown RBP13.9□□□□□ -0.18
CDR2-204ENST00000564542 A0A1B0GTH6 734 aa13.9□□□□□ -0.18
CDR2-204ENST00000564542 UBXN7O94888 489 aa13.9□□□□□ -0.18
CDR2-204ENST00000564542 CYP1A2P05177 515 aa13.9□□□□□ -0.18
CDR2-204ENST00000564542 MMP2P08253 660 aa13.9□□□□□ -0.18
CDR2-204ENST00000564542 MX2P20592 715 aa13.9□□□□□ -0.18
CDR2-204ENST00000564542 SSR1P43307 286 aaKnown RBP13.9□□□□□ -0.18
CDR2-204ENST00000564542 CD97P48960 835 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms