RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 C9orf172C9J069 976 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 AKR1B15C9JRZ8 316 aaPredicted RBP14.85□□□□□ -0.03
SPG7-210ENST00000564409 STMND1H3BQB6 276 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 GRID2O43424 1007 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 PSTPIP1O43586 416 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 SPOPO43791 374 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 NUAK1O60285 661 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 NDST3O95803 873 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 ATP1A1P05023 1023 aaKnown RBP14.85□□□□□ -0.03
SPG7-210ENST00000564409 THRAP10827 490 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 ETV5P41161 510 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 RAB15P59190 212 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 HHEXQ03014 270 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 TAZQ16635 292 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 ZNF569Q5MCW4 686 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 CHST15Q7LFX5 561 aaPredicted RBP14.85□□□□□ -0.03
SPG7-210ENST00000564409 TMC3Q7Z5M5 1100 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 SLC9B2Q86UD5 537 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 PHYKPLQ8IUZ5 450 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 TRAM1L1Q8N609 369 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 LRRN4Q8WUT4 740 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 SPATA16Q9BXB7 569 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 TRABDQ9H4I3 376 aa14.85□□□□□ -0.03
SPG7-210ENST00000564409 OAS3Q9Y6K5 1087 aaKnown RBP14.85□□□□□ -0.03
SPG7-210ENST00000564409 HELZ2Q9BYK8 2649 aaKnown RBP14.85□□□□□ -0.03
SPG7-210ENST00000564409 A0A0A6YYK5 440 aaPredicted RBP14.84□□□□□ -0.03
SPG7-210ENST00000564409 B4E171 279 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 EFSO43281 561 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 SLC25A14O95258 325 aaPredicted RBP14.84□□□□□ -0.03
SPG7-210ENST00000564409 EPOP01588 193 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 FGF3P11487 239 aaPredicted RBP14.84□□□□□ -0.03
SPG7-210ENST00000564409 SFTPCP11686 197 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 F3P13726 295 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 TSPAN7P41732 249 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 CDKN2BP42772 138 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 TNNT3P45378 269 aaPredicted RBP14.84□□□□□ -0.03
SPG7-210ENST00000564409 ATP1A2P50993 1020 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 GALNT3Q14435 633 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 TGIF1Q15583 401 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 ZDHHC20Q5W0Z9 365 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 TFB1MQ8WVM0 346 aaKnown RBP14.84□□□□□ -0.03
SPG7-210ENST00000564409 GLYATL1Q969I3 302 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 RNF25Q96BH1 459 aaPredicted RBP14.84□□□□□ -0.03
SPG7-210ENST00000564409 TEKT5Q96M29 485 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 PLEKHG4BQ96PX9 1271 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 TEFMQ96QE5 360 aaKnown RBP14.84□□□□□ -0.03
SPG7-210ENST00000564409 VAT1Q99536 393 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 GPR63Q9BZJ6 419 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 UCK1Q9HA47 277 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 GLOD4Q9HC38 313 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 LUC7LQ9NQ29 371 aaKnown RBP14.84□□□□□ -0.03
SPG7-210ENST00000564409 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.84□□□□□ -0.03
SPG7-210ENST00000564409 FOXJ2Q9P0K8 574 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 ATXN10Q9UBB4 475 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 TBC1D29Q9UFV1 150 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 ATMQ13315 3056 aa14.84□□□□□ -0.03
SPG7-210ENST00000564409 A6NCN8 305 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 CHUKO15111 745 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 VEGFDO43915 354 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 CCL4P13236 92 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 ACP5P13686 325 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 COMTP21964 271 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 CSF2RBP32927 897 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 TBX2Q13207 712 aaPredicted RBP14.83□□□□□ -0.04
SPG7-210ENST00000564409 PRKD1Q15139 912 aaPredicted RBP14.83□□□□□ -0.04
SPG7-210ENST00000564409 TFDP3Q5H9I0 405 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 DCAF12Q5T6F0 453 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 NKAIN2Q5VXU1 208 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 KIAA1614Q5VZ46 1190 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 MFSD7Q6UXD7 560 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 ZFAND4Q86XD8 727 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 RCBTB1Q8NDN9 531 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 GPR26Q8NDV2 337 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 DTX3LQ8TDB6 740 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 EID2BQ96D98 161 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 CALR3Q96L12 384 aaKnown RBP14.83□□□□□ -0.04
SPG7-210ENST00000564409 ZPBPQ9BS86 351 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 ZMYND15Q9H091 742 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
SPG7-210ENST00000564409 ZNF711Q9Y462 761 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 ADGRG1Q9Y653 693 aa14.83□□□□□ -0.04
SPG7-210ENST00000564409 GCN1Q92616 2671 aaKnown RBP14.83□□□□□ -0.04
SPG7-210ENST00000564409 LILRA5A6NI73 299 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 KMOO15229 486 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 CST8O60676 142 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 KCNJ13O60928 360 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 PLA2G2AP14555 144 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 XRCC1P18887 633 aaPredicted RBP14.82□□□□□ -0.04
SPG7-210ENST00000564409 PTPN3P26045 913 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 HMGCLP35914 325 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 LY6DQ14210 128 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 PCSK7Q16549 785 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 SARM1Q6SZW1 724 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 NPNTQ6UXI9 565 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 ARHGAP22Q7Z5H3 698 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 PLXDC1Q8IUK5 500 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 KATNAL2Q8IYT4 538 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 RCOR2Q8IZ40 523 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 P3H4Q92791 437 aa14.82□□□□□ -0.04
SPG7-210ENST00000564409 VPS35Q96QK1 796 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms