RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	PLD5	Q8N7P1	536 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	DNAJB14	Q8TBM8	379 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	IFT43	Q96FT9	208 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	HCN2	Q9UL51	889 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	IRAK3	Q9Y616	596 aa		4.24	□□□□□ -1.73
MACF1-231	ENST00000564288	DCAF8L1	A6NGE4	600 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L5	A8MUK1	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	INMT-MINDY4	F8WBC2	141 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HLA-DRA	P01903	254 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HIST1H2AD	P20671	130 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	STOM	P27105	288 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GYG1	P46976	350 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HACD4	Q5VWC8	232 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	PRR5L	Q6MZQ0	368 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC30A8	Q8IWU4	369 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	METTL6	Q8TCB7	284 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	TCEAL3	Q969E4	200 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HIST1H2AH	Q96KK5	128 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HIST1H2AJ	Q99878	128 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	H2AFJ	Q9BTM1	129 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	MALT1	Q9UDY8	824 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	QSOX1	O00391	747 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GDI2	P50395	445 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	BTG3	Q14201	252 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SNAPC1	Q16533	368 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DUSP7	Q16829	419 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RAVER2	Q9HCJ3	691 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	TUBAL3	A6NHL2	446 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	C2orf81	A6NN90	581 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	PDCD5	O14737	125 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	TNNI3	P19429	210 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	VARS	P26640	1264 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DNAJA1	P31689	397 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	CD81	P60033	236 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	EIF4H	Q15056	248 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HKDC1	Q2TB90	917 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	FNBP1L	Q5T0N5	605 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GALNT13	Q8IUC8	556 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	COLGALT1	Q8NBJ5	622 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HTR3C	Q8WXA8	447 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	PCDH10	Q9P2E7	1040 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	FAM220BP	B1ANY3	271 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L15	C9J2P7	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L13	C9JLJ4	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L11	C9JVI0	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L18	D6R9N7	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L22	D6RA61	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L17	D6RBQ6	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L19	D6RCP7	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L20	D6RJB6	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RASGRP1	O95267	797 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ANGPTL1	O95841	491 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	IFNA17	P01571	189 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RAB4B	P61018	213 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L24	Q0WX57	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L6P	Q6QN14	398 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	NECAB2	Q7Z6G3	386 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SYVN1	Q86TM6	617 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC37A3	Q8NCC5	494 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	NT5C1A	Q9BXI3	368 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	MCUB	Q9NWR8	336 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	THUMPD1	Q9NXG2	353 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	MOCS1	Q9NZB8	636 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RGS13	O14921	159 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	VEGFC	P49767	419 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RAB5B	P61020	215 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	KCTD20	Q7Z5Y7	419 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DCP1B	Q8IZD4	617 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	CADM3	Q8N126	398 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	OR5H6	Q8NGV6	325 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RNF139	Q8WU17	664 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	POF1B	Q8WVV4	589 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	JCHAIN	P01591	159 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GEM	P55040	296 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GABARAPL2	P60520	117 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DYNLL1	P63167	89 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	CFAP206	Q8IYR0	622 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	PCDHB18P	Q96TA0	734 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288		V9GYQ6	96 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SEC16A	O15027	2179 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	FAM234B	A2RU67	622 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288		E5RI56	91 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	MZF1	P28698	734 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	S100A2	P29034	98 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	BRCC3	P46736	316 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	CD83	Q01151	205 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DAG1	Q14118	895 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DLG2	Q15700	870 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	IL37	Q9NZH6	218 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	POU2F3	Q9UKI9	436 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	COQ4	Q9Y3A0	265 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	AP2A2	O94973	939 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GTF2B	Q00403	316 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF543	Q08ER8	600 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ILF3	Q12906	894 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GNA13	Q14344	377 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF699	Q32M78	642 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC36A3	Q495N2	470 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms