RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 CITED2Q99967 270 aaPredicted RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 LRRC1Q9BTT6 524 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 METTL22Q9BUU2 404 aaPredicted RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 SF3B5Q9BWJ5 86 aaKnown RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 TRIM9Q9C026 710 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 METTL8Q9H825 291 aaKnown RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 MINDY3Q9H8M7 445 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 UGT1A7Q9HAW7 530 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 UGT1A10Q9HAW8 530 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 UGT1A8Q9HAW9 530 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 NIT2Q9NQR4 276 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 XPNPEP1Q9NQW7 623 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 CHRAC1Q9NRG0 131 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 OGDHLQ9ULD0 1010 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 RIPK3Q9Y572 518 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 CASZ1Q86V15 1759 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 TMEM82A0PJX8 343 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZNF729A6NN14 1252 aaPredicted RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 IRAK2O43187 625 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 AOC2O75106 756 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 RFPL1O75677 317 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 CKMT2P17540 419 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 MMP8P22894 467 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 NR2F2P24468 414 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 MAPK4P31152 587 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 NRG1Q02297 640 aaPredicted RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 MERTKQ12866 999 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 BTBD16Q32M84 506 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 CYB5R4Q7L1T6 521 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 PIGWQ7Z7B1 504 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 MTDHQ86UE4 582 aaKnown RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 LACC1Q8IV20 430 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 SPAG16Q8N0X2 631 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 SLC35F6Q8N357 371 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 HDDC3Q8N4P3 179 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 DTX3LQ8TDB6 740 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 U2AF1L4Q8WU68 220 aaKnown RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 ESR2Q92731 530 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 HTRA1Q92743 480 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 AP2M1Q96CW1 435 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZNF514Q96K75 400 aaPredicted RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZNF558Q96NG5 402 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 ATP6V0BQ99437 205 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 BTBD1Q9H0C5 482 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 THG1LQ9NWX6 298 aaKnown RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 ACTR10Q9NZ32 417 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZNF225Q9UK10 706 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 ITGA11Q9UKX5 1188 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 PCDHGB6Q9Y5F9 930 aa5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 TNPO3Q9Y5L0 923 aaKnown RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 USP42Q9H9J4 1324 aaKnown RBP5.91□□□□□ -1.46
TUBGCP4-207ENST00000563963 PXDNLA1KZ92 1463 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 A0A075B6Q4 140 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 A0A1B0GV90 55 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 HS6ST1O60243 411 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 IPO13O94829 963 aaKnown RBP5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ABLIM3O94929 683 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 PNPP00491 289 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 GSNP06396 782 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 YES1P07947 543 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 TMIGD3P0DMS9 266 aaPredicted RBP5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 CCNB1P14635 433 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 PTAFRP25105 342 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 RPA1P27694 616 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ANTXR2P58335 489 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 GRM2Q14416 872 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ETFDHQ16134 617 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 C2CD6Q53TS8 623 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 PAN3Q58A45 887 aaKnown RBP5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ANKS1BQ7Z6G8 1248 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 PHTF2Q8N3S3 785 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 MB21D1Q8N884 522 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 C7orf43Q8WVR3 580 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 TMEM40Q8WWA1 233 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ATG4CQ96DT6 458 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 MRPL48Q96GC5 212 aaKnown RBP5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 NARS2Q96I59 477 aaKnown RBP5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 KLHL5Q96PQ7 755 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 P2RX7Q99572 595 aaKnown RBP5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 FAM118BQ9BPY3 351 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 TTLL2Q9BWV7 592 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 SEMA4CQ9C0C4 833 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 TMBIM4Q9HC24 238 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZHX2Q9Y6X8 837 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 WDR17Q8IZU2 1322 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ARHGEF28Q8N1W1 1705 aaKnown RBP5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 USP31Q70CQ4 1352 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 A8MU76 341 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 SLC22A2O15244 555 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 EFSO43281 561 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 TBC1D4O60343 1298 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 SPAG6O75602 509 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 GH2P01242 217 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 FAM153BP0C7A2 387 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 SLC2A1P11166 492 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ACADMP11310 421 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 PRPS1L1P21108 318 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 CDKN2CP42773 168 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 CCR4P51679 360 aa5.9□□□□□ -1.46
TUBGCP4-207ENST00000563963 ARHGAP8P85298 464 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms