RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 MAPK9P45984 424 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 ADCY2Q08462 1091 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 NOMO1Q15155 1222 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 TFDP3Q5H9I0 405 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 ZNF574Q6ZN55 896 aaPredicted RBP17.5■□□□□ 0.39
NME3-205ENST00000563854 DAAM2Q86T65 1068 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 TEKT5Q96M29 485 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 STN1Q9H668 368 aaKnown RBP17.5■□□□□ 0.39
NME3-205ENST00000563854 MAGEE1Q9HCI5 957 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 BPIFA1Q9NP55 256 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 LUC7LQ9NQ29 371 aaKnown RBP17.5■□□□□ 0.39
NME3-205ENST00000563854 FOXJ2Q9P0K8 574 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 TMEM9Q9P0T7 183 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 ATXN10Q9UBB4 475 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 TBC1D29Q9UFV1 150 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 SPO11Q9Y5K1 396 aa17.5■□□□□ 0.39
NME3-205ENST00000563854 SMG1Q96Q15 3661 aaKnown RBP17.5■□□□□ 0.39
NME3-205ENST00000563854 hCG_1818297A0A087WSY0 165 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 MACROD2A1Z1Q3 448 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 ZRANB2O95218 330 aaKnown RBP eCLIP17.49■□□□□ 0.397e-7■■■■□ 23.2
NME3-205ENST00000563854 CCL4P13236 92 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 ZNF8P17098 575 aaPredicted RBP17.49■□□□□ 0.39
NME3-205ENST00000563854 HADHBP55084 474 aaKnown RBP17.49■□□□□ 0.39
NME3-205ENST00000563854 NAP1L1P55209 391 aaKnown RBP17.49■□□□□ 0.39
NME3-205ENST00000563854 RHDQ02161 417 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 HHEXQ03014 270 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 WASHC5Q12768 1159 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 TAZQ16635 292 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 SNAP47Q5SQN1 464 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 CCDC181Q5TID7 509 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 KIAA1614Q5VZ46 1190 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 C11orf63Q6NUN7 778 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 TMC3Q7Z5M5 1100 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 ZFAND4Q86XD8 727 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 PHYKPLQ8IUZ5 450 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 CCDC170Q8IYT3 715 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 KATNAL2Q8IYT4 538 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 SFRP1Q8N474 314 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 SLC25A41Q8N5S1 370 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 OR10G6Q8NH81 332 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 KRT35Q92764 455 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 TADA1Q96BN2 335 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 RBM41Q96IZ5 413 aaKnown RBP17.49■□□□□ 0.39
NME3-205ENST00000563854 CCNL2Q96S94 520 aaPredicted RBP17.49■□□□□ 0.39
NME3-205ENST00000563854 ZSCAN5AQ9BUG6 496 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 HEMGNQ9BXL5 484 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 CARD9Q9H257 536 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 RMI1Q9H9A7 625 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 RAD18Q9NS91 495 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 FAM153AQ9UHL3 310 aa17.49■□□□□ 0.39
NME3-205ENST00000563854 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.49■□□□□ 0.39
NME3-205ENST00000563854 SCN8AQ9UQD0 1980 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 SOWAHDA6NJG2 315 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 K7ENP7 123 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 ERVH48-1M5A8F1 160 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 AURKAO14965 403 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 NVLO15381 856 aaKnown RBP17.48■□□□□ 0.39
NME3-205ENST00000563854 DUX1O43812 170 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 NUAK1O60285 661 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 MTX2O75431 263 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 LIPCP11150 499 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 BPIP17213 487 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 CD68P34810 354 aaPredicted RBP17.48■□□□□ 0.39
NME3-205ENST00000563854 FASLGP48023 281 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 LIMK2P53671 638 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 WNT3AP56704 352 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 DCDC1P59894 354 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 SRSF6Q13247 344 aaKnown RBP17.48■□□□□ 0.39
NME3-205ENST00000563854 SLC14A2Q15849 920 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 INSCQ1MX18 579 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 INO80CQ6PI98 192 aaPredicted RBP17.48■□□□□ 0.39
NME3-205ENST00000563854 PID1Q7Z2X4 250 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 RCOR2Q8IZ40 523 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 TRAM1L1Q8N609 369 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 OR4D9Q8NGE8 314 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 GLYATL1Q969I3 302 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 QKIQ96PU8 341 aaKnown RBP eCLIP17.48■□□□□ 0.39
NME3-205ENST00000563854 KLC4Q9NSK0 619 aa17.48■□□□□ 0.39
NME3-205ENST00000563854 ZFC3H1O60293 1989 aaKnown RBP17.48■□□□□ 0.39
NME3-205ENST00000563854 C9orf172C9J069 976 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 H7C0C1 242 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 MTSS1O43312 755 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 IPO7O95373 1038 aaKnown RBP17.47■□□□□ 0.39
NME3-205ENST00000563854 LCA5LO95447 670 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 SLC2A4P14672 509 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 CSTF2P33240 577 aaKnown RBP eCLIP17.47■□□□□ 0.39
NME3-205ENST00000563854 CHRNA4P43681 627 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 ATP5OP48047 213 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 ZNF75DP51815 510 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 GPLD1P80108 840 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 C19orf57Q0VDD7 668 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 CLPPQ16740 277 aaPredicted RBP17.47■□□□□ 0.39
NME3-205ENST00000563854 TMEM164Q5U3C3 297 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 ADGRG6Q86SQ4 1221 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 SLC9B2Q86UD5 537 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 VASH2Q86V25 355 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 FAM129CQ86XR2 697 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 ZNF567Q8N184 647 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 IPMKQ8NFU5 416 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 GDAP1Q8TB36 358 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms