RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 STX7O15400 261 aaKnown RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 NUAK1O60285 661 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 NOBOXO60393 691 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 PHF2O75151 1096 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 PPFIA2O75334 1257 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 MTX2O75431 263 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 ANXA6P08133 673 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 CTSEP14091 401 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 ZNF8P17098 575 aaPredicted RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 TCP1P17987 556 aaKnown RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 SPINK2P20155 84 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 MSNP26038 577 aaKnown RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 AK4P27144 223 aaPredicted RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 SPAM1P38567 509 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 MAGEA6P43360 314 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 TNNT3P45378 269 aaPredicted RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 CTBSQ01459 385 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 PEX6Q13608 980 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 TRIP13Q15645 432 aaPredicted RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 CERCAMQ5T4B2 595 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 ZCCHC8Q6NZY4 707 aaKnown RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 OGFOD3Q6PK18 319 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 FAM151BQ6UXP7 276 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 MARK2Q7KZI7 788 aaKnown RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 ZNF547Q8IVP9 402 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 SDR16C5Q8N3Y7 309 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 CHCHD4Q8N4Q1 142 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 KYQ8NBH2 561 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 ADAMTS14Q8WXS8 1223 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 CCDC97Q96F63 343 aaPredicted RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 NAPGQ99747 312 aaPredicted RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 C19orf43Q9BQ61 176 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 DUSP23Q9BVJ7 150 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 OR2AG1Q9H205 316 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 SUDS3Q9H7L9 328 aaPredicted RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 TRIM39Q9HCM9 518 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 EIF2B3Q9NR50 452 aaKnown RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 SPATS2LQ9NUQ6 558 aaKnown RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 FKBPLQ9UIM3 349 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 MOSPD1Q9UJG1 213 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 PRKAB1Q9Y478 270 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 PCDHGA1Q9Y5H4 931 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 ZNF106Q9H2Y7 1883 aaKnown RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 MAP1BP46821 2468 aaKnown RBP8.46□□□□□ -1.06
UBR1-204ENST00000563239 WDFY3Q8IZQ1 3526 aa8.46□□□□□ -1.06
UBR1-204ENST00000563239 FREM2Q5SZK8 3169 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 EME2A4GXA9 379 aaPredicted RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 FAM221BA6H8Z2 402 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 PRR19A6NJB7 356 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 C2orf81A6NN90 581 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 HYAL3O43820 417 aaPredicted RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 SLC25A14O95258 325 aaPredicted RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 ASMTLO95671 621 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 CRTAMO95727 393 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 EML2O95834 649 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 KRT14P02533 472 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 APRTP07741 180 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 ALPPL2P10696 532 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 PTGIRP43119 386 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 FNTAP49354 379 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 CDKN1CP49918 316 aaPredicted RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 ARSDP51689 593 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 CLDN6P56747 220 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 TMPRSS15P98073 1019 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 SHC2P98077 582 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 CDH17Q12864 832 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 FOXC1Q12948 553 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 KCNJ11Q14654 390 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 POU6F1Q14863 301 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 SMAD1Q15797 465 aaKnown RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 CCDC38Q502W7 563 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 PERM1Q5SV97 790 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 ANKRD22Q5VYY1 191 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 ZDHHC20Q5W0Z9 365 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 GUSBP11Q6P575 273 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 CCDC137Q6PK04 289 aaKnown RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 DHRS13Q6UX07 377 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 C4orf22Q6V702 233 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 ZNF534Q76KX8 674 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 GSTA5Q7RTV2 222 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 TAF8Q7Z7C8 310 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 C11orf96Q7Z7L8 435 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 LINC00523Q86TU6 105 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 C17orf82Q86X59 251 aaPredicted RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 GKN2Q86XP6 184 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 MARCH9Q86YJ5 346 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 FAM46DQ8NEK8 389 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 GPR156Q8NFN8 814 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 ZNF398Q8TD17 642 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 DNAJC1Q96KC8 554 aaKnown RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 ZNF778Q96MU6 729 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 OR2M4Q96R27 311 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 NAP1L3Q99457 506 aaPredicted RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 RYDENQ9NUL5 291 aaKnown RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 NLE1Q9NVX2 485 aaPredicted RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 SMOXQ9NWM0 555 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 TAAR2Q9P1P5 351 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 SLC23A2Q9UGH3 650 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 ZNHIT2Q9UHR6 403 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 RABGEF1Q9UJ41 708 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms