RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 LIG4P49917 911 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 METAP2P50579 478 aaKnown RBP eCLIP3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 ECT2LQ008S8 904 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 BNC1Q01954 994 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 ACSM2AQ08AH3 577 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 GAGE1Q13065 139 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 GAGE4Q13068 117 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 TRAF3Q13114 568 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 KYNUQ16719 465 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 KRBOX4Q5JUW0 171 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 ACSM2BQ68CK6 577 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 TYW3Q6IPR3 259 aaKnown RBP3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 PQLC2Q6ZP29 291 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 SNX32Q86XE0 403 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 ADHFE1Q8IWW8 467 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 POMGNT2Q8NAT1 580 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 ELP5Q8TE02 316 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 SGCDQ92629 289 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 PTERQ96BW5 349 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 PGAM5Q96HS1 289 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 SPATA17Q96L03 361 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 TMEM68Q96MH6 324 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 JAKMIP1Q96N16 626 aaKnown RBP3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 OR2A14Q96R47 310 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 SH3GL2Q99962 352 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 HAUS8Q9BT25 410 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 CCDC106Q9BWC9 280 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 KCNN2Q9H2S1 579 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 PDZD7Q9H5P4 517 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 OPA3Q9H6K4 179 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 GPR108Q9NPR9 543 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 SLC35C2Q9NQQ7 365 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 GIMAP4Q9NUV9 329 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 CDC14AQ9UNH5 594 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 MAU2Q9Y6X3 613 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 PASKQ96RG2 1323 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 IGLV5-52A0A0A0MRZ9 124 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 EME2A4GXA9 379 aaPredicted RBP3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 PRSS44E7EML9 344 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 HCRTR2O43614 444 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 SLC28A2O43868 658 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 ZIC3O60481 467 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 TBX10O75333 385 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 GPC4O75487 556 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 CYC1P08574 325 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 MYBL1P10243 752 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 G6PDP11413 515 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 DNASE1P24855 282 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 MC5RP33032 325 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 EIF2S3P41091 472 aaKnown RBP3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 TNNT3P45378 269 aaPredicted RBP3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 PPP2R2BQ00005 443 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 AMZ1Q400G9 498 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 C6orf163Q5TEZ5 329 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 GGNBP1Q5YKI7 109 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 JADE1Q6IE81 842 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 CFAP77Q6ZQR2 320 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 SEPT14Q6ZU15 432 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 KRT74Q7RTS7 529 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 SLFN11Q7Z7L1 901 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 ZC3HC1Q86WB0 502 aaKnown RBP3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 FOXRED2Q8IWF2 684 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 SCYL3Q8IZE3 742 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 SPATA6LQ8N4H0 392 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 OR8K5Q8NH50 307 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 IGSF8Q969P0 613 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 RMDN1Q96DB5 314 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 TMCO6Q96DC7 493 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 RRNAD1Q96FB5 475 aaKnown RBP3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 SIPA1Q96FS4 1042 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 DGAT2Q96PD7 388 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 CDRT15Q96T59 188 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 TMEM204Q9BSN7 226 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 DESI2Q9BSY9 194 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 KIFC3Q9BVG8 833 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 SPRY4Q9C004 299 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 PIGMQ9H3S5 423 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 GOLPH3LQ9H4A5 285 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 MMP25Q9NPA2 562 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 HINT3Q9NQE9 182 aaKnown RBP3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 MORF4L1Q9UBU8 362 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 SEC63Q9UGP8 760 aaKnown RBP3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF112Q9UJU3 913 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 ANAPC5Q9UJX4 755 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 PLAGL1Q9UM63 463 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 CMAHPQ9Y471 501 aa3.25□□□□□ -1.89
SHCBP1-202ENST00000563219 SOS1Q07889 1333 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 ATXN2Q99700 1313 aaKnown RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 LINC01553A4QN01 128 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 LRRC72A6NJI9 287 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 GLOD5A6NK44 160 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 C4orf47A7E2U8 309 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 AKR1B15C9JRZ8 316 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 PAPSS1O43252 624 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 PLRG1O43660 514 aaKnown RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 MITFO75030 526 aaPredicted RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 NDUFS7O75251 213 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 TBCAO75347 108 aaKnown RBP3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 AVILO75366 819 aa3.24□□□□□ -1.89
SHCBP1-202ENST00000563219 SLCO2B1O94956 709 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms