RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 CDK16Q00536 496 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 PDE1BQ01064 536 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 PUM1Q14671 1186 aaKnown RBP eCLIP17.29■□□□□ 0.369e-7■■■□□ 15.7
CCNDBP1-204ENST00000563065 ZDHHC20Q5W0Z9 365 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 PSAPL1Q6NUJ1 521 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 ADGRG6Q86SQ4 1221 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 MPP5Q8N3R9 675 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 PNPLA1Q8N8W4 532 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 NAT8LQ8N9F0 302 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 STYXQ8WUJ0 223 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 CCDC97Q96F63 343 aaPredicted RBP17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 CDKN2AIPNLQ96HQ2 116 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 TBATAQ96M53 351 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 TRIM31Q9BZY9 425 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 ASB8Q9H765 288 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 SYBUQ9NX95 663 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 GPSM3Q9Y4H4 160 aa17.29■□□□□ 0.36
CCNDBP1-204ENST00000563065 SPAARA0A1B0GVQ0 90 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 HEATR9A2RTY3 570 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 OR51F1A6NGY5 319 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 YY2O15391 372 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 SIGLEC6O43699 453 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 KCNK5O95279 499 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 IVLP07476 585 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 CSRP1P21291 193 aaKnown RBP17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 MC4RP32245 332 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 NOVA1P51513 510 aaKnown RBP17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 PYCR3Q53H96 274 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 TSTD2Q5T7W7 516 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 RNASEH2BQ5TBB1 312 aaKnown RBP17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 PDPK2PQ6A1A2 396 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 CES3Q6UWW8 571 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 OR13J1Q8NGT2 312 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 GDAP1Q8TB36 358 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 BAHD1Q8TBE0 780 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 SCARF2Q96GP6 870 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 VPS35Q96QK1 796 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 RANBP9Q96S59 729 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 TRIM39Q9HCM9 518 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 BFARQ9NZS9 450 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 ZNHIT2Q9UHR6 403 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 TCAF1Q9Y4C2 921 aa17.28■□□□□ 0.36
CCNDBP1-204ENST00000563065 DNALI1O14645 258 aaPredicted RBP17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 AK4P27144 223 aaPredicted RBP17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 HADHAP40939 763 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 NPY2RP49146 381 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 NFATC2Q13469 925 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 TRIP6Q15654 476 aaKnown RBP17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 PCID2Q5JVF3 399 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 GPRC6AQ5T6X5 926 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 IZUMO3Q5VZ72 239 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 NRROSQ86YC3 692 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 PHYKPLQ8IUZ5 450 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 SFTPA2Q8IWL1 248 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 PPIL6Q8IXY8 311 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 AGGF1Q8N302 714 aaeCLIP17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 MCUQ8NE86 351 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 DTX3LQ8TDB6 740 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 RUNDC3BQ96NL0 473 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 SERPINB12Q96P63 405 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 TRIM56Q9BRZ2 755 aaKnown RBP17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 SLC32A1Q9H598 525 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 APPL1Q9UKG1 709 aa17.27■□□□□ 0.36
CCNDBP1-204ENST00000563065 CCDC162PA2VCL2 907 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 NEMP2A6NFY4 417 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 LMO7DNF2Z398 122 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 RAD51CO43502 376 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 NUAK1O60285 661 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 PSMA3P25788 255 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 NMBRP28336 390 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 CTBSQ01459 385 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 TMEM115Q12893 351 aaPredicted RBP17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 DNAJC3Q13217 504 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 ITGA9Q13797 1035 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 DHX34Q14147 1143 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 ELOCQ15369 112 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 SKIDA1Q1XH10 827 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 ZRANB3Q5FWF4 1079 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 SYDE1Q6ZW31 735 aaPredicted RBP17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 ZNF572Q7Z3I7 529 aaPredicted RBP17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 TAF8Q7Z7C8 310 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 PPHLN1Q8NEY8 458 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 OR4C6Q8NH72 309 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 HDAC10Q969S8 669 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 CNDP2Q96KP4 475 aaKnown RBP17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 PWWP2AQ96N64 755 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 IL22Q9GZX6 179 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 NLGN3Q9NZ94 848 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 VPS18Q9P253 973 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 CSNK1G3Q9Y6M4 447 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 PLXNB3Q9ULL4 1909 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 SPTBN2O15020 2390 aa17.26■□□□□ 0.35
CCNDBP1-204ENST00000563065 KIF2AO00139 706 aaPredicted RBP17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 CDK14O94921 469 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 LDOC1O95751 146 aaPredicted RBP17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 ANXA6P08133 673 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 CEACAM1P13688 526 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 SARNPP82979 210 aaKnown RBP17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 PPM1JQ5JR12 505 aa17.25■□□□□ 0.35
CCNDBP1-204ENST00000563065 CRTC3Q6UUV7 619 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms