RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 AMACRQ9UHK6 382 aa12.85□□□□□ -0.35
SF3B3-202ENST00000562722 TUBD1Q9UJT1 453 aa12.85□□□□□ -0.35
SF3B3-202ENST00000562722 CNOT6Q9ULM6 557 aaKnown RBP12.85□□□□□ -0.35
SF3B3-202ENST00000562722 KIR2DS5A0A0G2JLQ3 304 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 A0A0G2JNG1 304 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 FADS2P1A8MWK0 482 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 KIR2DS3K7RE56 304 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 MTA2O94776 668 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 PRLP01236 227 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 SERPING1P05155 500 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 CYP1A2P05177 515 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 F3P13726 295 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 TPM4P67936 248 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 MC1RQ01726 317 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 GBE1Q04446 702 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 FOXM1Q08050 763 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 CDC20Q12834 499 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 GALNT3Q14435 633 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 IHHQ14623 411 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 KIR2DS5Q14953 304 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 PDK2Q15119 407 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 PLA2G4EQ3MJ16 856 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 ATP13A4Q4VNC1 1196 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 COLEC12Q5KU26 742 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 HENMT1Q5T8I9 393 aaKnown RBP12.84□□□□□ -0.35
SF3B3-202ENST00000562722 HGSNATQ68CP4 663 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 PLXDC1Q8IUK5 500 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 MAP7D3Q8IWC1 876 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 RAVER1Q8IY67 606 aaKnown RBP12.84□□□□□ -0.35
SF3B3-202ENST00000562722 CCDC13Q8IYE1 715 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 ARRDC2Q8TBH0 407 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 CPLX3Q8WVH0 158 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 STARD8Q92502 1023 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 RNF31Q96EP0 1072 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 EPN3Q9H201 632 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 OR2AG1Q9H205 316 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 TRIT1Q9H3H1 467 aaKnown RBP12.84□□□□□ -0.35
SF3B3-202ENST00000562722 EPB41L1Q9H4G0 881 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 ARFGAP3Q9NP61 516 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 PRDM8Q9NQV8 689 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 FBXO8Q9NRD0 319 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 KLC4Q9NSK0 619 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 TMEM63CQ9P1W3 806 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 CTTNBP2NLQ9P2B4 639 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 HECTD1Q9ULT8 2610 aa12.84□□□□□ -0.35
SF3B3-202ENST00000562722 BOD1L1Q8NFC6 3051 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 A0A087X0T9 212 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 RGSL1A5PLK6 1076 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 OR5K4A6NMS3 321 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 PDZK1P1A8MUH7 402 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 NUAK1O60285 661 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 JCHAINP01591 159 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 FAM228BP0C875 321 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 ZNF8P17098 575 aaPredicted RBP12.83□□□□□ -0.36
SF3B3-202ENST00000562722 TCN2P20062 427 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 ARSEP51690 589 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 ABHD18Q0P651 414 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 SEPT6Q14141 434 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 NR1I3Q14994 352 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 SEPT7Q16181 437 aaKnown RBP12.83□□□□□ -0.36
SF3B3-202ENST00000562722 QPCTQ16769 361 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 INSCQ1MX18 579 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 FIGNQ5HY92 759 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 ZNF648Q5T619 568 aaPredicted RBP12.83□□□□□ -0.36
SF3B3-202ENST00000562722 ALKBH5Q6P6C2 394 aaKnown RBP12.83□□□□□ -0.36
SF3B3-202ENST00000562722 CRTC3Q6UUV7 619 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 TIPARPQ7Z3E1 657 aaKnown RBP12.83□□□□□ -0.36
SF3B3-202ENST00000562722 CPNE8Q86YQ8 564 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 ESX1Q8N693 406 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 FAM71BQ8TC56 605 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 APOBEC4Q8WW27 367 aaKnown RBP12.83□□□□□ -0.36
SF3B3-202ENST00000562722 FATE1Q969F0 183 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 TSGA13Q96PP4 275 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 WDR24Q96S15 920 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 LYSMD1Q96S90 227 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 ULBP3Q9BZM4 244 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 CARD9Q9H257 536 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 ATXN10Q9UBB4 475 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 ANAPC2Q9UJX6 822 aa12.83□□□□□ -0.36
SF3B3-202ENST00000562722 A0A1W2PQJ5 194 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 A6NCN8 305 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 LILRA5A6NI73 299 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 ANKRD66B4E2M5 251 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 KCNK1O00180 336 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 RASSF9O75901 435 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 PROSCO94903 275 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 SLC25A14O95258 325 aaPredicted RBP12.82□□□□□ -0.36
SF3B3-202ENST00000562722 VIPP01282 170 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 KRT7P08729 469 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 TYRP1P17643 537 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 AMD1P17707 334 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 OAS2P29728 719 aaKnown RBP12.82□□□□□ -0.36
SF3B3-202ENST00000562722 CASRP41180 1078 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 SEPHS1P49903 392 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 GFERP55789 205 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 ATP1A1-AS1Q5TC04 95 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 SYN2Q92777 582 aaPredicted RBP12.82□□□□□ -0.36
SF3B3-202ENST00000562722 TGM7Q96PF1 710 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 ZFYVE1Q9HBF4 777 aa12.82□□□□□ -0.36
SF3B3-202ENST00000562722 SHOC2Q9UQ13 582 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms