RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 PERPQ96FX8 193 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 TMEM19Q96HH6 336 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 TMEM68Q96MH6 324 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 SH3GL2Q99962 352 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 PCGF1Q9BSM1 259 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 MUC13Q9H3R2 512 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 ABCF3Q9NUQ8 709 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 TINAGQ9UJW2 476 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 CEPT1Q9Y6K0 416 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 PIAS3Q9Y6X2 628 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 MAU2Q9Y6X3 613 aa3.03□□□□□ -1.92
DENND4A-205ENST00000562540 CGNL1Q0VF96 1302 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 A0A1W2PQF6 199 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 PI4KAP2A4QPH2 592 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 F5H0A9 414 aaPredicted RBP3.02□□□□□ -1.93
DENND4A-205ENST00000562540 RFPL2O75678 378 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 RNASEH2AO75792 299 aaKnown RBP3.02□□□□□ -1.93
DENND4A-205ENST00000562540 MLYCDO95822 493 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 FTCDO95954 541 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 EGFP01133 1207 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 EIF2S1P05198 315 aaKnown RBP3.02□□□□□ -1.93
DENND4A-205ENST00000562540 PRSS1P07477 247 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 ACADMP11310 421 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 ZNF10P21506 573 aaPredicted RBP3.02□□□□□ -1.93
DENND4A-205ENST00000562540 IL15P40933 162 aaPredicted RBP3.02□□□□□ -1.93
DENND4A-205ENST00000562540 CLCNKAP51800 687 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 SEC61BP60468 96 aaKnown RBP3.02□□□□□ -1.93
DENND4A-205ENST00000562540 OASLQ15646 514 aaKnown RBP3.02□□□□□ -1.93
DENND4A-205ENST00000562540 KRT24Q2M2I5 525 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 SNX30Q5VWJ9 437 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 TTI2Q6NXR4 508 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 TMEM154Q6P9G4 183 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 ZNF497Q6ZNH5 498 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 C1orf122Q6ZSJ8 110 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 CACNA2D4Q7Z3S7 1137 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 SH2D6Q7Z4S9 175 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 TBC1D1Q86TI0 1168 aaPredicted RBP3.02□□□□□ -1.93
DENND4A-205ENST00000562540 ARHGAP12Q8IWW6 846 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 ANKRD52Q8NB46 1076 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 POMGNT1Q8WZA1 660 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 ARHGEF2Q92974 986 aaKnown RBP3.02□□□□□ -1.93
DENND4A-205ENST00000562540 TTC14Q96N46 770 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 SH2D4AQ9H788 454 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 POLR1BQ9H9Y6 1135 aa3.02□□□□□ -1.93
DENND4A-205ENST00000562540 RANGRFQ9HD47 186 aaPredicted RBP3.02□□□□□ -1.93
DENND4A-205ENST00000562540 ITIH6Q6UXX5 1313 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 FAM237AA0A1B0GTK4 181 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 A0A1W2PS18 150 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 LIPT2A6NK58 231 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 ZNF587BE7ETH6 402 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 LAMP2P13473 410 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 CDH2P19022 906 aaPredicted RBP3.01□□□□□ -1.93
DENND4A-205ENST00000562540 CAPN3P20807 821 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 BDKRB2P30411 391 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 HOXC9P31274 260 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 PIK3CAP42336 1068 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 FMO5P49326 533 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 HNRNPH2P55795 449 aaKnown RBP3.01□□□□□ -1.93
DENND4A-205ENST00000562540 BRWD1-AS2P59051 145 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 ARF3P61204 181 aaPredicted RBP3.01□□□□□ -1.93
DENND4A-205ENST00000562540 CSNK2A1P68400 391 aaPredicted RBP3.01□□□□□ -1.93
DENND4A-205ENST00000562540 ARF1P84077 181 aaKnown RBP3.01□□□□□ -1.93
DENND4A-205ENST00000562540 ZBED6P86452 979 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 FOXM1Q08050 763 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 NIPAL4Q0D2K0 466 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 MAMLD1Q13495 774 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 EIF4A2Q14240 407 aaKnown RBP3.01□□□□□ -1.93
DENND4A-205ENST00000562540 CDONQ4KMG0 1287 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 BSPRYQ5W0U4 402 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 SIGIRRQ6IA17 410 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 RGMBQ6NW40 437 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 C4orf50Q6ZRC1 276 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 SEPT14Q6ZU15 432 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 FOXRED2Q8IWF2 684 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 LYG1Q8N1E2 194 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 NGEFQ8N5V2 710 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 ZNF248Q8NDW4 579 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 CSNK2A3Q8NEV1 391 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 OR2AK2Q8NG84 335 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 OR14L1PQ8NHC6 308 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 RND1Q92730 232 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 ORAI1Q96D31 301 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 C1orf74Q96LT6 269 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 TIGD1Q96MW7 591 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 WDFY2Q96P53 400 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 F2RL3Q96RI0 385 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 ACOX2Q99424 681 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 DCTN5Q9BTE1 182 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 C1RLQ9NZP8 487 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 CWC15Q9P013 229 aaKnown RBP3.01□□□□□ -1.93
DENND4A-205ENST00000562540 KCNS2Q9ULS6 477 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 CORO1CQ9ULV4 474 aaPredicted RBP3.01□□□□□ -1.93
DENND4A-205ENST00000562540 MTMR6Q9Y217 621 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 AMDHD2Q9Y303 409 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 PSAT1Q9Y617 370 aa3.01□□□□□ -1.93
DENND4A-205ENST00000562540 GOLGA6L9A6NEM1 432 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 H3BQ06 376 aaPredicted RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 CAPN9O14815 690 aa3□□□□□ -1.93
DENND4A-205ENST00000562540 USO1O60763 962 aaKnown RBP3□□□□□ -1.93
DENND4A-205ENST00000562540 ZBED4O75132 1171 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms