RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 HEATR9A2RTY3 570 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 MROH6A6NGR9 719 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 NUAK1O60285 661 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 SRP72O76094 671 aaKnown RBP16.55■□□□□ 0.24
CLK3-207ENST00000562389 DKK1O94907 266 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 FTH1P19P0C7X4 201 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 CKMT2P17540 419 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 ILF3Q12906 894 aaKnown RBP eCLIP16.55■□□□□ 0.24
CLK3-207ENST00000562389 PEX6Q13608 980 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 CERCAMQ5T4B2 595 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 N4BP2L1Q5TBK1 243 aaPredicted RBP16.55■□□□□ 0.24
CLK3-207ENST00000562389 ZNF534Q76KX8 674 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 MARK2Q7KZI7 788 aaKnown RBP16.55■□□□□ 0.24
CLK3-207ENST00000562389 TAF8Q7Z7C8 310 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 ADGRG6Q86SQ4 1221 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 GALNT13Q8IUC8 556 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 DDHD1Q8NEL9 900 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 ZNF398Q8TD17 642 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 SCG3Q8WXD2 468 aaKnown RBP16.55■□□□□ 0.24
CLK3-207ENST00000562389 APOLD1Q96LR9 279 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 C16orf45Q96MC5 204 aaPredicted RBP16.55■□□□□ 0.24
CLK3-207ENST00000562389 GSDMCQ9BYG8 508 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 SUDS3Q9H7L9 328 aaPredicted RBP16.55■□□□□ 0.24
CLK3-207ENST00000562389 NCKIPSDQ9NZQ3 722 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 RIMKLBQ9ULI2 386 aa16.55■□□□□ 0.24
CLK3-207ENST00000562389 APOBEC2Q9Y235 224 aaKnown RBP16.55■□□□□ 0.24
CLK3-207ENST00000562389 LY6G6EA0A0G2JKS1 128 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 TCRBV7S3A2A0A539 114 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 AGAP14A8MT82 685 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 CHUKO15111 745 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 GPR39O43194 453 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 VEGFDO43915 354 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 UGT1A9O60656 530 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 CKMT1AP12532 417 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 ZNF8P17098 575 aaPredicted RBP16.54■□□□□ 0.24
CLK3-207ENST00000562389 UGT1A6P19224 532 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 UGT1A1P22309 533 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 UGT1A4P22310 534 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 ACP1P24666 158 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 ADRA1DP25100 572 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 UGT1A3P35503 534 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 UGT1A5P35504 534 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 ADCY8P40145 1251 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 PTGIRP43119 386 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 ACADVLP49748 655 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 TMPRSS15P98073 1019 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 DNAJC3Q13217 504 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 NFATC2Q13469 925 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 PTK6Q13882 451 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 LRP8Q14114 963 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 PPP1R7Q15435 360 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 TCEA2Q15560 299 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 LDLRAP1Q5SW96 308 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 ZNF648Q5T619 568 aaPredicted RBP16.54■□□□□ 0.24
CLK3-207ENST00000562389 LRRC8BQ6P9F7 803 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 NRROSQ86YC3 692 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 CCL4L1Q8NHW4 92 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 CPT1BQ92523 772 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 PEX13Q92968 403 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 OR2AG1Q9H205 316 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 ASB8Q9H765 288 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 UGT1A7Q9HAW7 530 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 UGT1A10Q9HAW8 530 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 UGT1A8Q9HAW9 530 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 ARFGAP3Q9NP61 516 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 EVA1BQ9NVM1 165 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 TCAF1Q9Y4C2 921 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 GPSM3Q9Y4H4 160 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 PCDHGA1Q9Y5H4 931 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 PCYT1BQ9Y5K3 369 aaPredicted RBP16.54■□□□□ 0.24
CLK3-207ENST00000562389 U3KQA8 63 aa16.54■□□□□ 0.24
CLK3-207ENST00000562389 ARHGEF17Q96PE2 2063 aaPredicted RBP16.54■□□□□ 0.24
CLK3-207ENST00000562389 GRID2O43424 1007 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 MTX2O75431 263 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 ITGALP20701 1170 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 MC4RP32245 332 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 CA5AP35218 305 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 NPY2RP49146 381 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 SARNPP82979 210 aaKnown RBP16.53■□□□□ 0.24
CLK3-207ENST00000562389 DAB2P98082 770 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 CTBSQ01459 385 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 SKIDA1Q1XH10 827 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 KHDC1Q4VXA5 237 aaKnown RBP16.53■□□□□ 0.24
CLK3-207ENST00000562389 CCDC38Q502W7 563 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 GPRC6AQ5T6X5 926 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 TSTD2Q5T7W7 516 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 ANKRD22Q5VYY1 191 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 SYDE1Q6ZW31 735 aaPredicted RBP16.53■□□□□ 0.24
CLK3-207ENST00000562389 NLRP9Q7RTR0 991 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 SNX20Q7Z614 316 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 SLCO6A1Q86UG4 719 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 KLHL7Q8IXQ5 586 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 PPHLN1Q8NEY8 458 aaKnown RBP16.53■□□□□ 0.24
CLK3-207ENST00000562389 GDAP1Q8TB36 358 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 GLMNQ92990 594 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 ULK4Q96C45 1275 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 CDKN2AIPNLQ96HQ2 116 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 ZCCHC2Q9C0B9 1178 aaKnown RBP16.53■□□□□ 0.24
CLK3-207ENST00000562389 IL22Q9GZX6 179 aa16.53■□□□□ 0.24
CLK3-207ENST00000562389 BFARQ9NZS9 450 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms