RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DNAAF3Q8N9W5 541 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 FAM181AQ8N9Y4 354 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 OR4C6Q8NH72 309 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 CDKN2AIPNLQ96HQ2 116 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 ZNF778Q96MU6 729 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 KRT12Q99456 494 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 TRIM39Q9HCM9 518 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 PIH1D1Q9NWS0 290 aaKnown RBP13.3□□□□□ -0.28
CDH1-204ENST00000562118 NLGN3Q9NZ94 848 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 SPASTQ9UBP0 616 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 SUFUQ9UMX1 484 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 SOX13Q9UN79 622 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 BTBD3Q9Y2F9 522 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 PCYT1BQ9Y5K3 369 aaPredicted RBP13.3□□□□□ -0.28
CDH1-204ENST00000562118 LY6G6EA0A0G2JKS1 128 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 GPR39O43194 453 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 AQP9O43315 295 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 RAD51CO43502 376 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 BUD23O43709 281 aaKnown RBP13.29□□□□□ -0.28
CDH1-204ENST00000562118 VEGFDO43915 354 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 SLC4A1P02730 911 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 ARNTP27540 789 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 FOXN2P32314 431 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 LMAN1P49257 510 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 ARSDP51689 593 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 CLCNKAP51800 687 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 SARNPP82979 210 aaKnown RBP13.29□□□□□ -0.28
CDH1-204ENST00000562118 IL9RQ01113 521 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 C2orf54Q08AI8 447 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 LRP8Q14114 963 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 SKIDA1Q1XH10 827 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 PROX2Q3B8N5 592 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 INAVAQ3KP66 663 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 GPR33Q49SQ1 333 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 DUPD1Q68J44 220 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 FAM151BQ6UXP7 276 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 SNX20Q7Z614 316 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 C11orf96Q7Z7L8 435 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 TMEM135Q86UB9 458 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 TRIM74Q86UV6 250 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 NRROSQ86YC3 692 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 KIF18AQ8NI77 898 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 TSACCQ96A04 125 aaPredicted RBP13.29□□□□□ -0.28
CDH1-204ENST00000562118 SIGLEC10Q96LC7 697 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 TRIM51Q9BSJ1 452 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 BOCQ9BWV1 1114 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 SLC13A1Q9BZW2 595 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 MRPL40Q9NQ50 206 aaKnown RBP13.29□□□□□ -0.28
CDH1-204ENST00000562118 SYBUQ9NX95 663 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 BFARQ9NZS9 450 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 ATXN10Q9UBB4 475 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 U3KQA8 63 aa13.29□□□□□ -0.28
CDH1-204ENST00000562118 INPP4BO15327 924 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 SGTAO43765 313 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 SH3BP5O60239 455 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 ZNF500O60304 480 aaPredicted RBP13.28□□□□□ -0.28
CDH1-204ENST00000562118 AVILO75366 819 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 URI1O94763 535 aaPredicted RBP13.28□□□□□ -0.28
CDH1-204ENST00000562118 TNFP01375 233 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 CEACAM1P13688 526 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 MGAT1P26572 445 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 ADCY8P40145 1251 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 POLD2P49005 469 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 DRG2P55039 364 aaKnown RBP13.28□□□□□ -0.28
CDH1-204ENST00000562118 B4GALNT1Q00973 533 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 PUM1Q14671 1186 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDH1-204ENST00000562118 ZNF658BQ4V348 819 aaPredicted RBP13.28□□□□□ -0.28
CDH1-204ENST00000562118 CCDC38Q502W7 563 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 ZNF542PQ5EBM4 170 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 LDLRAP1Q5SW96 308 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 GPRC6AQ5T6X5 926 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 OGFOD3Q6PK18 319 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 PACS1Q6VY07 963 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 MAATS1Q7Z4T9 603 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 C17orf82Q86X59 251 aaPredicted RBP13.28□□□□□ -0.28
CDH1-204ENST00000562118 GATAD2AQ86YP4 633 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 ZNF547Q8IVP9 402 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 NXPE1Q8N323 547 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 MMGT1Q8N4V1 131 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 PPHLN1Q8NEY8 458 aaKnown RBP13.28□□□□□ -0.28
CDH1-204ENST00000562118 ZNF398Q8TD17 642 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 ULK4Q96C45 1275 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 ERP44Q9BS26 406 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 DUSP23Q9BVJ7 150 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 CHRAC1Q9NRG0 131 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 TOR4AQ9NXH8 423 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 SLC2A6Q9UGQ3 507 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 ASIC3Q9UHC3 531 aa13.28□□□□□ -0.28
CDH1-204ENST00000562118 FAM237BA0A1B0GVD1 139 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 A6NCN8 305 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 NEMP2A6NFY4 417 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 E7ESA3 106 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 TRIM38O00635 465 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 UGT1A9O60656 530 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 SDC3O75056 442 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 SLC25A14O95258 325 aaPredicted RBP13.27□□□□□ -0.29
CDH1-204ENST00000562118 CELA2BP08218 269 aaPredicted RBP13.27□□□□□ -0.29
CDH1-204ENST00000562118 ZNF8P17098 575 aaPredicted RBP13.27□□□□□ -0.29
CDH1-204ENST00000562118 UGT1A6P19224 532 aa13.27□□□□□ -0.29
CDH1-204ENST00000562118 UGT1A1P22309 533 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms