RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	KRT32	Q14532	448 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	OASL	Q15646	514 aa	Known RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	CEP78	Q5JTW2	689 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	COLEC12	Q5KU26	742 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	SH2D4B	Q5SQS7	431 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	NAA35	Q5VZE5	725 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMEM268	Q5VZI3	342 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	HAUS3	Q68CZ6	603 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZNF793	Q6ZN11	406 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	B4GALNT4	Q76KP1	1039 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	IGFN1	Q86VF2	1251 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	NUP93	Q8N1F7	819 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	FAM98A	Q8NCA5	519 aa	Known RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	DNAAF1	Q8NEP3	725 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	OR52N4	Q8NGI2	321 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	C17orf50	Q8WW18	174 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	DDB2	Q92466	427 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	RNF125	Q96EQ8	232 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	P2RY11	Q96G91	374 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	APOPT1	Q96IL0	206 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	C16orf45	Q96MC5	204 aa	Predicted RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	TEX13B	Q9BXU2	312 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	PAIP1	Q9H074	479 aa	Known RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	PDCL3	Q9H2J4	239 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	MOV10	Q9HCE1	1003 aa	Known RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	NRIP3	Q9NQ35	241 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	MCM9	Q9NXL9	1143 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	QPCTL	Q9NXS2	382 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	CLIP2	Q9UDT6	1046 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	MOSPD1	Q9UJG1	213 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	HPCAL4	Q9UM19	191 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	TRIM17	Q9Y577	477 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	PCDHGB5	Q9Y5G0	923 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	HTT	P42858	3142 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	LOC285556	D6RIA3	1793 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZSWIM8	A7E2V4	1837 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ATAD5	Q96QE3	1844 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	CYP2D7	A0A087X1C5	515 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	LINC00854	A0A1B0GVQ3	168 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	C2CD4B	A6NLJ0	364 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	CCDC169	A6NNP5	214 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	KCNU1	A8MYU2	1149 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	RHOD	O00212	210 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	TNPO2	O14787	897 aa	Known RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	SPTLC2	O15270	562 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMEM63A	O94886	807 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	IL1A	P01583	271 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	OPN1MW	P04001	364 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	QDPR	P09417	244 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	OPN1MW2	P0DN77	364 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	OPN1MW3	P0DN78	364 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	FCGR2A	P12318	317 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ITGB6	P18564	788 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	HLA-DPA1	P20036	260 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	HNF1B	P35680	557 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	CDH15	P55291	814 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	PROK1	P58294	105 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	NLRP5	P59047	1200 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	POLR2F	P61218	127 aa	Known RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	RPS13	P62277	151 aa	Known RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	DYNLL1	P63167	89 aa	Known RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	SRSF4	Q08170	494 aa	Known RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	PMPCA	Q10713	525 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	PPIL2	Q13356	520 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	CAMK1	Q14012	370 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	CEP55	Q53EZ4	464 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ALG10	Q5BKT4	473 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ALG10B	Q5I7T1	473 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	FAM69A	Q5T7M9	428 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	RAB12	Q6IQ22	244 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	NAA16	Q6N069	864 aa	Predicted RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	IL27RA	Q6UWB1	636 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZNF66	Q6ZN08	573 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	FAM47E	Q6ZV65	393 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	PLEKHM3	Q6ZWE6	761 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	FAM57B	Q71RH2	274 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	YTHDF3	Q7Z739	585 aa	Known RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	PRPF39	Q86UA1	669 aa	Known RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ERO1B	Q86YB8	467 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	MYOCD	Q8IZQ8	938 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	GALNT16	Q8N428	558 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMEM217	Q8N7C4	229 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZNF366	Q8N895	744 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	SCAI	Q8N9R8	606 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	DENND6B	Q8NEG7	585 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	IPMK	Q8NFU5	416 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	TNIP2	Q8NFZ5	429 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	PRSS3P2	Q8NHM4	247 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	RFWD2	Q8NHY2	731 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	HSPH1	Q92598	858 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZUFSP	Q96AP4	578 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	ABHD8	Q96I13	439 aa		4.19	□□□□□ -1.74
LRRC28-222	ENST00000561431	CNDP1	Q96KN2	507 aa		4.19	□□□□□ -1.74

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