RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 OR2AG1Q9H205 316 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 FAM114A2Q9NRY5 505 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 CATSPERZQ9NTU4 200 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 TRNAU1APQ9NX07 287 aaKnown RBP10.62□□□□□ -0.71
TPM1-229ENST00000561242 FKBPLQ9UIM3 349 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 RIMKLBQ9ULI2 386 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 GPR34Q9UPC5 381 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 NEU2Q9Y3R4 380 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 TCAF1Q9Y4C2 921 aa10.62□□□□□ -0.71
TPM1-229ENST00000561242 A0A0U1RQS6 177 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 RHPN2P1A8MT19 583 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 PDZK1P1A8MUH7 402 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 IFRD1O00458 451 aaPredicted RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 TPP1O14773 563 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 AURKAO14965 403 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 SCAMP1O15126 338 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 KPNA5O15131 536 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 SPINT1O43278 529 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 UGT1A9O60656 530 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 PIAS2O75928 621 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 FTH1P02794 183 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 UGT1A6P19224 532 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 UGT1A1P22309 533 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 UGT1A4P22310 534 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 DGKAP23743 735 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 UGT1A3P35503 534 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 UGT1A5P35504 534 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 ACTR1BP42025 376 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 ITGA8P53708 1063 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 ACTR1AP61163 376 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 ILF2Q12905 390 aaKnown RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 NFATC2Q13469 925 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 TMED2Q15363 201 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 NR0B2Q15466 257 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 TRIP6Q15654 476 aaKnown RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 ATP13A5Q4VNC0 1218 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 SYTL3Q4VX76 610 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 ZCCHC8Q6NZY4 707 aaKnown RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 TTC23LQ6PF05 361 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 TMEM220Q6QAJ8 160 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 CRTC3Q6UUV7 619 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 CCDC25Q86WR0 208 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 GATAD2AQ86YP4 633 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 LMNTD2Q8IXW0 634 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 TTC30BQ8N4P2 665 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 OR13C4Q8NGS5 318 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 IFT81Q8WYA0 676 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 CPT1BQ92523 772 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 SH3KBP1Q96B97 665 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 ZNF669Q96BR6 464 aaPredicted RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 LRRC39Q96DD0 335 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 AHCYL2Q96HN2 611 aaKnown RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 CNDP2Q96KP4 475 aaKnown RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 NSMCE3Q96MG7 304 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 SMIM14Q96QK8 99 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 FAM96AQ9H5X1 160 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 SYNDIG1Q9H7V2 258 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 UGT1A7Q9HAW7 530 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 UGT1A10Q9HAW8 530 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 UGT1A8Q9HAW9 530 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 MRM3Q9HC36 420 aaKnown RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 CHRAC1Q9NRG0 131 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 C20orf96Q9NUD7 363 aaPredicted RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 ZDHHC3Q9NYG2 299 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 NLGN3Q9NZ94 848 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 SIRPGQ9P1W8 387 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 WHRNQ9P202 907 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 NFKBIL1Q9UBC1 381 aaPredicted RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 SUFUQ9UMX1 484 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 MRFAP1Q9Y605 127 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 DNMT3AQ9Y6K1 912 aaPredicted RBP10.61□□□□□ -0.71
TPM1-229ENST00000561242 RPS6KL1Q9Y6S9 549 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 DGKBQ9Y6T7 804 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 C5orf42Q9H799 3197 aa10.61□□□□□ -0.71
TPM1-229ENST00000561242 UBA6A0AVT1 1052 aaPredicted RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 TMEM202A6NGA9 273 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 OR5K4A6NMS3 321 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 E5RI56 91 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 H3BMM5 538 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 TNFSF14O43557 240 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 SH3BP5O60239 455 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 GDF9O60383 454 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 VAPBO95292 243 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 GOT2P00505 430 aaKnown RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 GSTM1P09488 218 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 CEACAM1P13688 526 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 ATP1B2P14415 290 aaPredicted RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 PGAM1P18669 254 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 CSRP1P21291 193 aaKnown RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 MCM3P25205 808 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 PBLDP30039 288 aaPredicted RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 PHBP35232 272 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 NSG1P42857 185 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 PLTPP55058 493 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 E2F1Q01094 437 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 PLOD1Q02809 727 aaPredicted RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 GUCY2DQ02846 1103 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 GSTM4Q03013 218 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 BNIP3Q12983 259 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 OLIG2Q13516 323 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms