RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CAGE1Q8TC20 777 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 AGR3Q8TD06 166 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 C2CD4CQ8TF44 421 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 U2AF1L4Q8WU68 220 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 GIMAP1Q8WWP7 306 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ZCCHC14Q8WYQ9 949 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 RAPGEF5Q92565 580 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PABPC5Q96DU9 382 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 ARSGQ96EG1 525 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 GIMAP5Q96F15 307 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 C14orf79Q96F83 325 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 EDC3Q96F86 508 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 RRNAD1Q96FB5 475 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 NUDT11Q96G61 164 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 BORCS6Q96GS4 357 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 TMEM176AQ96HP8 235 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 TPD52L3Q96J77 140 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 RPGRIP1Q96KN7 1286 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 KIF16BQ96L93 1317 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 LINC00615Q96LM1 132 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 SAMD8Q96LT4 415 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ADAD1Q96M93 576 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 ZNF512Q96ME7 567 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 SPATA13Q96N96 652 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SFXN2Q96NB2 322 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 MS4A10Q96PG2 267 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 OSBPL9Q96SU4 736 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 GPHA2Q96T91 129 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PIK3R4Q99570 1358 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SEPT5Q99719 369 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 GORASP1Q9BQQ3 440 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CLSTN3Q9BQT9 956 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CCDC77Q9BR77 488 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PCGF1Q9BSM1 259 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 OSBPL8Q9BZF1 889 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 NACAP1Q9BZK3 213 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 KCNK15Q9H427 330 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CUEDC2Q9H467 287 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SRD5A3Q9H8P0 318 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 RPF1Q9H9Y2 349 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 SAP30LQ9HAJ7 183 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FANCEQ9HB96 536 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 TRPV5Q9NQA5 729 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 DDX4Q9NQI0 724 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 FAM114A2Q9NRY5 505 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ZCCHC3Q9NUD5 404 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 DNAJC11Q9NVH1 559 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 DDX18Q9NVP1 670 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 TRNAU1APQ9NX07 287 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 SOHLH2Q9NX45 425 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 UTP6Q9NYH9 597 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 TMOD3Q9NYL9 352 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.04□□□□□ -2.08
RTF1-207ENST00000561076 OR6C3Q9NZP0 311 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 LARSQ9P2J5 1176 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 CRNNQ9UBG3 495 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 TRMT6Q9UJA5 497 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 AMFRQ9UKV5 643 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 NUDCQ9Y266 331 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 REXO2Q9Y3B8 237 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 A0A096LPK6 155 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 C2orf92A0A1B0GVN3 265 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 LINC00854A0A1B0GVQ3 168 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 FAM230AA0A1W2PPH8 454 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 TCRBV7S3A2A0A539 114 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 C1orf226A1L170 272 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ELOVL7A1L3X0 281 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CPED1A4D0V7 1026 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 FAM149AA5PLN7 773 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 FAM90A8PA6NJQ4 464 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 BOLA2-SMG1P6H3BVE0 249 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 L7N2F9 121 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 M0QZQ0 153 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 EBAG9O00559 213 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PRRG1O14668 218 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 TO15178 435 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CTDSPLO15194 276 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PPIP5K2O43314 1243 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PLRG1O43660 514 aaKnown RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 CDC14BO60729 498 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ATP9AO75110 1047 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 STC2O76061 302 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CNTN5O94779 1100 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 SUN1O94901 812 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 GLCEO94923 617 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 MFN2O95140 757 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 OR6A2O95222 327 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PRAMEF12O95522 483 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 NFATC1O95644 943 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PTBP3O95758 552 aaKnown RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 SLC16A8O95907 504 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CH25HO95992 272 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PDGFBP01127 241 aaPredicted RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 C9P02748 559 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 KRT6BP04259 564 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 FESP07332 822 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CD63P08962 238 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 FAM90A13PP0C7W8 464 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 FAM90A24PP0C7X0 464 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ZNF888P0CJ79 500 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms