RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 MPP5Q8N3R9 675 aa16.52■□□□□ 0.23
RPL28-211ENST00000560881 CCDC97Q96F63 343 aaPredicted RBP16.52■□□□□ 0.23
RPL28-211ENST00000560881 TRIM56Q9BRZ2 755 aaKnown RBP16.52■□□□□ 0.23
RPL28-211ENST00000560881 NLE1Q9NVX2 485 aaPredicted RBP16.52■□□□□ 0.23
RPL28-211ENST00000560881 PCOLCE2Q9UKZ9 415 aa16.52■□□□□ 0.23
RPL28-211ENST00000560881 TCAF1Q9Y4C2 921 aa16.52■□□□□ 0.23
RPL28-211ENST00000560881 TRIM38O00635 465 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 DNALI1O14645 258 aaPredicted RBP16.51■□□□□ 0.23
RPL28-211ENST00000560881 TNFRSF10CO14798 259 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 AQP9O43315 295 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 RAD51CO43502 376 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 PPFIA2O75334 1257 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 SRP72O76094 671 aaKnown RBP16.51■□□□□ 0.23
RPL28-211ENST00000560881 TNFP01375 233 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 MC4RP32245 332 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 CDKN1CP49918 316 aaPredicted RBP16.51■□□□□ 0.23
RPL28-211ENST00000560881 CDK16Q00536 496 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 PDE1BQ01064 536 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 DEFB133Q30KQ1 61 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 IZUMO3Q5VZ72 239 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 ZDHHC20Q5W0Z9 365 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 PHYKPLQ8IUZ5 450 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 PNPLA1Q8N8W4 532 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 OR13J1Q8NGT2 312 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 RHBDD1Q8TEB9 315 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 STYXQ8WUJ0 223 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 RUNDC3BQ96NL0 473 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 SERPINB12Q96P63 405 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 RTKNQ9BST9 563 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 OR2AG1Q9H205 316 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 CHRAC1Q9NRG0 131 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 ATXN10Q9UBB4 475 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 PLEKHM1Q9Y4G2 1056 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 ST14Q9Y5Y6 855 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 MRFAP1Q9Y605 127 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 DGKBQ9Y6T7 804 aa16.51■□□□□ 0.23
RPL28-211ENST00000560881 HEATR9A2RTY3 570 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 CBFA2T3O75081 653 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 MYF5P13349 255 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 CTSEP14091 401 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 ZNF8P17098 575 aaPredicted RBP16.5■□□□□ 0.23
RPL28-211ENST00000560881 ADRA1DP25100 572 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 HADHAP40939 763 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 GRK6P43250 576 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 ID4P47928 161 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 DHX34Q14147 1143 aaKnown RBP16.5■□□□□ 0.23
RPL28-211ENST00000560881 SUZ12Q15022 739 aaKnown RBP16.5■□□□□ 0.23
RPL28-211ENST00000560881 SMAD1Q15797 465 aaKnown RBP16.5■□□□□ 0.23
RPL28-211ENST00000560881 TSTD2Q5T7W7 516 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 PDPK2PQ6A1A2 396 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 PSAPL1Q6NUJ1 521 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 CES3Q6UWW8 571 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 ZNF572Q7Z3I7 529 aaPredicted RBP16.5■□□□□ 0.23
RPL28-211ENST00000560881 ADGRG6Q86SQ4 1221 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 PPIL6Q8IXY8 311 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 AGGF1Q8N302 714 aaeCLIP16.5■□□□□ 0.23
RPL28-211ENST00000560881 GDAP1Q8TB36 358 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 ZNF398Q8TD17 642 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 TBATAQ96M53 351 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 VPS35Q96QK1 796 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 ASB8Q9H765 288 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 SPASTQ9UBP0 616 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 COL5A1P20908 1838 aaPredicted RBP16.5■□□□□ 0.23
RPL28-211ENST00000560881 KIF2AO00139 706 aaPredicted RBP16.5■□□□□ 0.23
RPL28-211ENST00000560881 DNAJC6O75061 913 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 IVLP07476 585 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 BLKP51451 505 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 CKAP4Q07065 602 aaKnown RBP16.5■□□□□ 0.23
RPL28-211ENST00000560881 NFATC2Q13469 925 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 ITGA9Q13797 1035 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 GPRC6AQ5T6X5 926 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 SYDE1Q6ZW31 735 aaPredicted RBP16.5■□□□□ 0.23
RPL28-211ENST00000560881 PPHLN1Q8NEY8 458 aaKnown RBP16.5■□□□□ 0.23
RPL28-211ENST00000560881 KIF18AQ8NI77 898 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 CDKN2AIPNLQ96HQ2 116 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 PWWP2AQ96N64 755 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 RANBP9Q96S59 729 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 GPSM3Q9Y4H4 160 aa16.5■□□□□ 0.23
RPL28-211ENST00000560881 CCDC162PA2VCL2 907 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 BANF1O75531 89 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 AK4P27144 223 aaPredicted RBP16.49■□□□□ 0.23
RPL28-211ENST00000560881 NMBRP28336 390 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 NOVA1P51513 510 aaKnown RBP16.49■□□□□ 0.23
RPL28-211ENST00000560881 PLA2G4EQ3MJ16 856 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 PYCR3Q53H96 274 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 ZRANB3Q5FWF4 1079 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 CRTC3Q6UUV7 619 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 SFTPA2Q8IWL1 248 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 MCUQ8NE86 351 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 BAHD1Q8TBE0 780 aaPredicted RBP16.49■□□□□ 0.23
RPL28-211ENST00000560881 HDAC10Q969S8 669 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 SCARF2Q96GP6 870 aaPredicted RBP16.49■□□□□ 0.23
RPL28-211ENST00000560881 IL22Q9GZX6 179 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 TRIM39Q9HCM9 518 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 BFARQ9NZS9 450 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 VPS18Q9P253 973 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 ZNHIT2Q9UHR6 403 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 APPL1Q9UKG1 709 aa16.49■□□□□ 0.23
RPL28-211ENST00000560881 SPTBN2O15020 2390 aa16.48■□□□□ 0.23
RPL28-211ENST00000560881 SPAARA0A1B0GVQ0 90 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms