RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 GTF3C4Q9UKN8 822 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 NFE2L3Q9Y4A8 694 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 KCNE2Q9Y6J6 123 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 GPRASP1Q5JY77 1395 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 A0A0G2JPF8 293 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 A0A1W2PQ09 198 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 A0A1W2PQM1 296 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 PRR23AA6NEV1 266 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 HNRNPCL3B7ZW38 293 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 BCAT2O15382 392 aaPredicted RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 HTATSF1O43719 755 aaKnown RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 HNRNPCL1O60812 293 aaKnown RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 NDUFS7O75251 213 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 EIF2S1P05198 315 aaKnown RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 HNRNPCL4P0DMR1 293 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 COX7A2P14406 83 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 ITGAXP20702 1163 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 GCH1P30793 250 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 PPARGP37231 505 aaPredicted RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 IL15P40933 162 aaPredicted RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 GARSP41250 739 aaKnown RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 ZNF41P51814 821 aaPredicted RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 ZNF132P52740 706 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 RAD23BP54727 409 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 PRAMEP78395 509 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 PHEXP78562 749 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 RBP5P82980 135 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 WASHC5Q12768 1159 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 BFSP1Q12934 665 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 ZBTB17Q13105 803 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 COG2Q14746 738 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 MRGPRG-AS1Q2M3A8 158 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 ODF2Q5BJF6 829 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 BMP2KLQ5H9B9 411 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 RAB41Q5JT25 222 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 SERTAD4-AS1Q5TG53 156 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 TMEM154Q6P9G4 183 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 SARM1Q6SZW1 724 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 FAM47EQ6ZV65 393 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 SMIM29Q86T20 159 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 TADA2BQ86TJ2 420 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 KIAA2013Q8IYS2 634 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 FRMD1Q8N878 549 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 ZNF441Q8N8Z8 693 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 POMGNT2Q8NAT1 580 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 AGBL3Q8NEM8 1001 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 LNX1Q8TBB1 728 aaPredicted RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 ZNF653Q96CK0 615 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 KIF1BPQ96EK5 621 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 TMEM19Q96HH6 336 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 ZNF570Q96NI8 536 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 SIN3AQ96ST3 1273 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 CSF3RQ99062 836 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 KXD1Q9BQD3 176 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 MXRA8Q9BRK3 442 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 DESI2Q9BSY9 194 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 TEX12Q9BXU0 123 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 C17orf75Q9HAS0 396 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 NOX4Q9NPH5 578 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 MARCH4Q9P2E8 410 aaPredicted RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 ZFP37Q9Y6Q3 630 aaPredicted RBP3.7□□□□□ -1.82
SPG11-218ENST00000559754 FAM169AQ9Y6X4 670 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 CGNL1Q0VF96 1302 aa3.7□□□□□ -1.82
SPG11-218ENST00000559754 CYSRT1A8MQ03 144 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 A8MXE2 369 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 AKR1B15C9JRZ8 316 aaPredicted RBP3.69□□□□□ -1.82
SPG11-218ENST00000559754 ADAM20O43506 726 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 XPNPEP2O43895 674 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 CRYAAP02489 173 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 ATP1A1P05023 1023 aaKnown RBP3.69□□□□□ -1.82
SPG11-218ENST00000559754 CETPP11597 493 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 IFNAR1P17181 557 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 KCNA5P22460 613 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 ICAM3P32942 547 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 PIK3CAP42336 1068 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 LMAN1P49257 510 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 HILS1P60008 231 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 UFM1P61960 85 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 UBXN2AP68543 259 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 PPARDQ03181 441 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 PPP2R5CQ13362 524 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 TDGQ13569 410 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 SMC1AQ14683 1233 aaKnown RBP3.69□□□□□ -1.82
SPG11-218ENST00000559754 VEPH1Q14D04 833 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 EFNB3Q15768 340 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 TTC31Q49AM3 519 aaPredicted RBP3.69□□□□□ -1.82
SPG11-218ENST00000559754 KLHL35Q6PF15 583 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 GPAT4Q86UL3 456 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 CNTROBQ8N137 903 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 SCML4Q8N228 414 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 CARNMT1Q8N4J0 409 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 C11orf65Q8NCR3 313 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 OR8H1Q8NGG4 311 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 RUFY2Q8WXA3 655 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 WBP2Q969T9 261 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 FBXL8Q96CD0 374 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 CMTM3Q96MX0 182 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 PIP5K1AQ99755 562 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 NDST4Q9H3R1 872 aa3.69□□□□□ -1.82
SPG11-218ENST00000559754 KAT14Q9H8E8 782 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms