RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 ZNF30P17039 623 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 IVDP26440 423 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 AKT2P31751 481 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 MLLT3P42568 568 aaPredicted RBP16.74■□□□□ 0.27
PSEN1-224ENST00000559361 CLDN2P57739 230 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 CAV1Q03135 178 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 CALCOCO2Q13137 446 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 LAMB3Q13751 1172 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 RNASEH2BQ5TBB1 312 aaKnown RBP16.74■□□□□ 0.27
PSEN1-224ENST00000559361 DUPD1Q68J44 220 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 ZCCHC8Q6NZY4 707 aaKnown RBP16.74■□□□□ 0.27
PSEN1-224ENST00000559361 EXD3Q8N9H8 876 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 NOA1Q8NC60 698 aaKnown RBP16.74■□□□□ 0.27
PSEN1-224ENST00000559361 SEC14L1Q92503 715 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 ATXN7L3BQ96GX2 97 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 BMFQ96LC9 184 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 C19orf43Q9BQ61 176 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 TRIM51Q9BSJ1 452 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 FICDQ9BVA6 458 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 MAGEE1Q9HCI5 957 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 FZD3Q9NPG1 666 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 IL17BQ9UHF5 180 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 CSNK1G3Q9Y6M4 447 aa16.74■□□□□ 0.27
PSEN1-224ENST00000559361 UNC13CQ8NB66 2214 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 EME2A4GXA9 379 aaPredicted RBP16.73■□□□□ 0.27
PSEN1-224ENST00000559361 F5H423 210 aaPredicted RBP16.73■□□□□ 0.27
PSEN1-224ENST00000559361 EFSO43281 561 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 CSF2P04141 144 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 PDHA1P08559 390 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 PDE1BQ01064 536 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 CLN3Q13286 438 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 QPCTQ16769 361 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 TMEM259Q4ZIN3 620 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 SIRPB2Q5JXA9 342 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 IZUMO3Q5VZ72 239 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 KIAA1161Q6NSJ0 714 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 CCDC81Q6ZN84 652 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 Q6ZSR6 202 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 DPPA4Q7L190 304 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 ZSWIM9Q86XI8 627 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 NAT8LQ8N9F0 302 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 LRRC1Q9BTT6 524 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 PCDH12Q9NPG4 1184 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 KCTD5Q9NXV2 234 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 FADS3Q9Y5Q0 445 aa16.73■□□□□ 0.27
PSEN1-224ENST00000559361 PMS2P1A4D2B8 440 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 PSMD11O00231 422 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 NEMP1O14524 444 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 TCEA3O75764 348 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 HEXIM1O94992 359 aaKnown RBP16.72■□□□□ 0.27
PSEN1-224ENST00000559361 AGTP01019 485 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 NME1P15531 152 aaKnown RBP16.72■□□□□ 0.27
PSEN1-224ENST00000559361 VIPR1P32241 457 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 MMP12P39900 470 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 FZD2Q14332 565 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 GALNT3Q14435 633 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 TMEM52BQ4KMG9 183 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 ZNF542PQ5EBM4 170 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 GUSBP11Q6P575 273 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 LRRC8BQ6P9F7 803 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 XKR5Q6UX68 686 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 DNAAF3Q8N9W5 541 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 ZNF548Q8NEK5 533 aaPredicted RBP16.72■□□□□ 0.27
PSEN1-224ENST00000559361 CASS4Q9NQ75 786 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 FAM114A2Q9NRY5 505 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 DNAJC28Q9NX36 388 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 NCKIPSDQ9NZQ3 722 aa16.72■□□□□ 0.27
PSEN1-224ENST00000559361 SPTY2D1-AS1A0A0U1RR47 76 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 POM121BA6NF01 834 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 A6NNZ2 444 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 TERTO14746 1132 aaKnown RBP16.71■□□□□ 0.27
PSEN1-224ENST00000559361 ABL2P42684 1182 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 RPL21P46778 160 aaKnown RBP16.71■□□□□ 0.27
PSEN1-224ENST00000559361 RPS21P63220 83 aaKnown RBP16.71■□□□□ 0.27
PSEN1-224ENST00000559361 ARHGEF7Q14155 803 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 CDKN3Q16667 212 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 LINC00303Q3SY05 128 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 FAM182AQ5T1J6 154 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 SEL1L3Q68CR1 1132 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 DENND5AQ6IQ26 1287 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 HIBCHQ6NVY1 386 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-224ENST00000559361 RBM44Q6ZP01 1051 aaKnown RBP16.71■□□□□ 0.27
PSEN1-224ENST00000559361 KDELC2Q7Z4H8 507 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 TAB3Q8N5C8 712 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-224ENST00000559361 SLC25A41Q8N5S1 370 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 CXorf40AQ8TE69 158 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 PTCD2Q8WV60 388 aaKnown RBP16.71■□□□□ 0.27
PSEN1-224ENST00000559361 CCNL2Q96S94 520 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-224ENST00000559361 FOXP3Q9BZS1 431 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 PHACTR1Q9C0D0 580 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 IL22Q9GZX6 179 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 BFARQ9NZS9 450 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 B4GALT6Q9UBX8 382 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 KLF15Q9UIH9 416 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 ANAPC5Q9UJX4 755 aa16.71■□□□□ 0.27
PSEN1-224ENST00000559361 RGSL1A5PLK6 1076 aa16.7■□□□□ 0.26
PSEN1-224ENST00000559361 TPP1O14773 563 aa16.7■□□□□ 0.26
PSEN1-224ENST00000559361 PPFIA2O75334 1257 aa16.7■□□□□ 0.26
PSEN1-224ENST00000559361 CRTAMO95727 393 aa16.7■□□□□ 0.26
PSEN1-224ENST00000559361 NPY2RP49146 381 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms