RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 RBFAQ8N0V3 343 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 CHCHD4Q8N4Q1 142 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 FIBCD1Q8N539 461 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 ZNF557Q8N988 423 aaPredicted RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 PCYOX1LQ8NBM8 494 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 PYDC1Q8WXC3 89 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 LINGO1Q96FE5 620 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 LBHD1Q9BQE6 289 aaPredicted RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 EMILIN2Q9BXX0 1053 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 LRRC3Q9BY71 257 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 CLPBQ9H078 707 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 ASAH2Q9NR71 780 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 GNPTGQ9UJJ9 305 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 SARDHQ9UL12 918 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 DHRS7Q9Y394 339 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 TNPO3Q9Y5L0 923 aaKnown RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 TRIM38O00635 465 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 KIAA0355O15063 1070 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 OR1I1O60431 355 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 NIPSNAP2O75323 286 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 CXCL14O95715 111 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 MT-CO1P00395 513 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 C8AP07357 584 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 SPATA31D3P0C874 917 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 HSPA8P11142 646 aaKnown RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 LBPP18428 481 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 TSPAN8P19075 237 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 DDX6P26196 483 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLPX-204ENST00000559152 SNRPD1P62314 119 aaKnown RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 GRIK2Q13002 908 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 CRY1Q16526 586 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 PLEKHG6Q3KR16 790 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 GPR33Q49SQ1 333 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 LILRA6Q6PI73 481 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 SPATA31D4Q6ZUB0 917 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 ADAMTSL2Q86TH1 951 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 CAMK1DQ8IU85 385 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 BBS7Q8IWZ6 715 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 CBARPQ8N350 705 aaPredicted RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 SIDT2Q8NBJ9 832 aaKnown RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 OR56A4Q8NGH8 313 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 RIN3Q8TB24 985 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 GRIN3AQ8TCU5 1115 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 WFDC5Q8TCV5 224 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 ZNF483Q8TF39 744 aaPredicted RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 DIS3LQ8TF46 1054 aaKnown RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 ISG20Q96AZ6 181 aaKnown RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 ROPN1LQ96C74 230 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 TUBGCP5Q96RT8 1024 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 NPAS2Q99743 824 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 TM6SF2Q9BZW4 377 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 AKTIPQ9H8T0 292 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 NUDT4Q9NZJ9 180 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 CCDC167Q9P0B6 97 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 EVLQ9UI08 416 aaPredicted RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 MTF2Q9Y483 593 aaPredicted RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 BPTFQ12830 3046 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 A0A1W2PQ67 120 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 NPEPPSL1A6NEC2 478 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 LEFTY2O00292 366 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 CDC7O00311 574 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 PEX1O43933 1283 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 NRP2O60462 931 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 ESRRBO95718 433 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 TSPAN12O95859 305 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 S100BP04271 92 aaPredicted RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 UROSP10746 265 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 CTPS1P17812 591 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 RGS4P49798 205 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 THOP1P52888 689 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 PSME3P61289 254 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 LMAN2Q12907 356 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 PPP1R3AQ16821 1122 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 KIF19Q2TAC6 998 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 PTRHD1Q6GMV3 140 aaKnown RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 GRAMD4Q6IC98 578 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 GK5Q6ZS86 529 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 SPATA19Q7Z5L4 167 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 DDIASQ8IXT1 998 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 MIER2Q8N344 545 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 PLCD3Q8N3E9 789 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 KREMEN2Q8NCW0 462 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 OR2AP1Q8NGE2 309 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 EEF1AKMT1Q8WVE0 214 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 SMIM14Q96QK8 99 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 ECSITQ9BQ95 431 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 KLHL4Q9C0H6 718 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 SPAG4Q9NPE6 437 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 CACNA2D2Q9NY47 1150 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 CD274Q9NZQ7 290 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 PSMD13Q9UNM6 376 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 FNDC3AQ9Y2H6 1198 aaKnown RBP11.19□□□□□ -0.62
CLPX-204ENST00000559152 ANKRD36A6QL64 1941 aa11.19□□□□□ -0.62
CLPX-204ENST00000559152 C1orf232A0A0U1RR37 186 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 CAPN8A6NHC0 703 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 SOBPA7XYQ1 873 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 K7ERQ8 282 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 SCAMP3O14828 347 aaKnown RBP11.18□□□□□ -0.62
CLPX-204ENST00000559152 PIP5K1BO14986 540 aa11.18□□□□□ -0.62
CLPX-204ENST00000559152 BCAS2O75934 225 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms