RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SCARF2Q96GP6 870 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-208ENST00000558827 MRGPRX2Q96LB1 330 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 ZNF578Q96N58 590 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-208ENST00000558827 SLC46A1Q96NT5 459 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 FICDQ9BVA6 458 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 MAGEE1Q9HCI5 957 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 TBC1D29Q9UFV1 150 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 APPL1Q9UKG1 709 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 DNAJC16Q9Y2G8 782 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 AHCTF1Q8WYP5 2266 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 BPTFQ12830 3046 aa12.4□□□□□ -0.43
SMAD3-208ENST00000558827 GRID2O43424 1007 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 NUDT21O43809 227 aaKnown RBP12.39□□□□□ -0.43
SMAD3-208ENST00000558827 UGT1A9O60656 530 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 PYGLP06737 847 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 UGT1A6P19224 532 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 UGT1A1P22309 533 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 UGT1A4P22310 534 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 CTNNA2P26232 953 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 UGT1A3P35503 534 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 UGT1A5P35504 534 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 ETV5P41161 510 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 MAPK9P45984 424 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 RWDD2BP57060 319 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 PCBP4P57723 403 aaKnown RBP12.39□□□□□ -0.43
SMAD3-208ENST00000558827 CXADRP78310 365 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 NFATC2Q13469 925 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 SPARCL1Q14515 664 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 PPP2R5EQ16537 467 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 KHDC1Q4VXA5 237 aaKnown RBP12.39□□□□□ -0.43
SMAD3-208ENST00000558827 ZNF569Q5MCW4 686 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 SNAP47Q5SQN1 464 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 ZNF574Q6ZN55 896 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-208ENST00000558827 ADGRG6Q86SQ4 1221 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 C17orf82Q86X59 251 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-208ENST00000558827 LSMEM2Q8N112 164 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 WDR48Q8TAF3 677 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 GDAP1Q8TB36 358 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 CCDC110Q8TBZ0 833 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 SLC37A2Q8TED4 501 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 KCNE4Q8WWG9 221 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 RNF31Q96EP0 1072 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 BBC3Q96PG8 261 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-208ENST00000558827 FCRL5Q96RD9 977 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 STRADBQ9C0K7 418 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 ZMYND15Q9H091 742 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 OSGEPL1Q9H4B0 414 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 UGT1A7Q9HAW7 530 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 UGT1A10Q9HAW8 530 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 UGT1A8Q9HAW9 530 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 CPNE5Q9HCH3 593 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 PRDM8Q9NQV8 689 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 THSD1Q9NS62 852 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 KLC4Q9NSK0 619 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 TMEM9Q9P0T7 183 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 SLC23A2Q9UGH3 650 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 AMFRQ9UKV5 643 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 TMPRSS11EQ9UL52 423 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 LOXL2Q9Y4K0 774 aa12.39□□□□□ -0.43
SMAD3-208ENST00000558827 LOC285095A0A1B0GVY8 99 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 A8MU76 341 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 HACD1B0YJ81 288 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 APOC4-APOC2K7ER74 178 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 PLD2O14939 933 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 KCNN4O15554 427 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 PJA2O43164 708 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 APOC2P02655 101 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 PTMAP06454 111 aaKnown RBP12.38□□□□□ -0.43
SMAD3-208ENST00000558827 JMJD7P0C870 316 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 RBP3P10745 1247 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 PSMB4P28070 264 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 CD1CP29017 333 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 SLC5A2P31639 672 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 TNNT3P45378 269 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-208ENST00000558827 TLE3Q04726 772 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 SRSF6Q13247 344 aaKnown RBP12.38□□□□□ -0.43
SMAD3-208ENST00000558827 C16orf72Q14CZ0 275 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 TGIF1Q15583 401 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 CHRNA6Q15825 494 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 SEPT7Q16181 437 aaKnown RBP12.38□□□□□ -0.43
SMAD3-208ENST00000558827 FAM151BQ6UXP7 276 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 PEX26Q7Z412 305 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 PIM3Q86V86 326 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 TTC30BQ8N4P2 665 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 TRAM1L1Q8N609 369 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 LRRC57Q8N9N7 239 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 ZNF248Q8NDW4 579 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 GLYATL1Q969I3 302 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 TMEM74Q96NL1 305 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 GORASP1Q9BQQ3 440 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 KCNK4Q9NYG8 393 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 KCTD3Q9Y597 815 aa12.38□□□□□ -0.43
SMAD3-208ENST00000558827 PRAMEF33A0A0G2JMD5 474 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 TCRBV7S2A1N4TA0A589 114 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 CCDC66A2RUB6 948 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 RGSL1A5PLK6 1076 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 MTSS1O43312 755 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 NUAK1O60285 661 aa12.37□□□□□ -0.43
SMAD3-208ENST00000558827 DXOO77932 396 aaKnown RBP12.37□□□□□ -0.43
SMAD3-208ENST00000558827 CCL4P13236 92 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms