RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 NIPSNAP2O75323 286 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 NDUFS3O75489 264 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 RASSF9O75901 435 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 SRP72O76094 671 aaKnown RBP12.86□□□□□ -0.35
SMAD3-207ENST00000558763 HSPA4LO95757 839 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 RBP1P09455 135 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 OPRD1P41143 372 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 VASPP50552 380 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-207ENST00000558763 KCNJ2P63252 427 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 SEMG2Q02383 582 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 OR4D1Q15615 310 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 ZRANB3Q5FWF4 1079 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 VWA5B1Q5TIE3 1220 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 PAQR3Q6TCH7 311 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 FAM151BQ6UXP7 276 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 TREML1Q86YW5 311 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 WDR75Q8IWA0 830 aaKnown RBP12.86□□□□□ -0.35
SMAD3-207ENST00000558763 PPP4R1Q8TF05 950 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 CYB5D2Q8WUJ1 264 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 STN1Q9H668 368 aaKnown RBP12.86□□□□□ -0.35
SMAD3-207ENST00000558763 ZDHHC6Q9H6R6 413 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 ALG9Q9H6U8 611 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 SAR1AQ9NR31 198 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 ARHGEF3Q9NR81 526 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 HEBP1Q9NRV9 189 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 ARL8BQ9NVJ2 186 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 DNAJC28Q9NX36 388 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 DEC1Q9P2X7 70 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 WASF2Q9Y6W5 498 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 COL4A2P08572 1712 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 AGAP14A8MT82 685 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 TTC34A8MYJ7 566 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 PRAMEF1O95521 474 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 POP4O95707 220 aaKnown RBP12.85□□□□□ -0.35
SMAD3-207ENST00000558763 UGT2B4P06133 528 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 MTHFD2P13995 350 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 PKMP14618 531 aaKnown RBP12.85□□□□□ -0.35
SMAD3-207ENST00000558763 IDH3AP50213 366 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 NFKB2Q00653 900 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 TDGQ13569 410 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 GRAMD4Q6IC98 578 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 TRIM67Q6ZTA4 783 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 SFTPA1Q8IWL2 248 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 KIF2BQ8N4N8 673 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 CD200R1Q8TD46 325 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 ZNF641Q96N77 438 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-207ENST00000558763 ATOH8Q96SQ7 321 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 GPR21Q99679 349 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 CIPCQ9C0C6 399 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 LRMDAQ9H2I8 198 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 TXLNGQ9NUQ3 528 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 ARMCX1Q9P291 453 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 SLC27A6Q9Y2P4 619 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 RAP2CQ9Y3L5 183 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 MATN2O00339 956 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 BNIP3LO60238 219 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 NPHS1O60500 1241 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 IPO13O94829 963 aaKnown RBP12.85□□□□□ -0.35
SMAD3-207ENST00000558763 RHOBTB1O94844 696 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 CTSLP07711 333 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 PTGER3P43115 390 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 NFATC2Q13469 925 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 KRT72Q14CN4 511 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 ACCSLQ4AC99 568 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 AARS2Q5JTZ9 985 aaKnown RBP12.85□□□□□ -0.35
SMAD3-207ENST00000558763 IER5LQ5T953 404 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 LRRC66Q68CR7 880 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 KLC3Q6P597 504 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 EPGNQ6UW88 154 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 TPRG1Q6ZUI0 275 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 PIWIL4Q7Z3Z4 852 aaKnown RBP12.85□□□□□ -0.35
SMAD3-207ENST00000558763 CBARPQ8N350 705 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-207ENST00000558763 GPR26Q8NDV2 337 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 SREK1Q8WXA9 508 aaKnown RBP12.85□□□□□ -0.35
SMAD3-207ENST00000558763 KCNJ9Q92806 393 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 UTP4Q969X6 686 aaKnown RBP12.85□□□□□ -0.35
SMAD3-207ENST00000558763 CCDC106Q9BWC9 280 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 DERL2Q9GZP9 239 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 MTG2Q9H4K7 406 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 SLC40A1Q9NP59 571 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 TNFRSF12AQ9NP84 129 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 TAS2R13Q9NYV9 303 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 ZDHHC2Q9UIJ5 367 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 VPS9D1Q9Y2B5 631 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 PIAS3Q9Y6X2 628 aa12.85□□□□□ -0.35
SMAD3-207ENST00000558763 TSPAN11A1L157 253 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 A8MX80 341 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 GRID2O43424 1007 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 JUNP05412 331 aaKnown RBP12.84□□□□□ -0.35
SMAD3-207ENST00000558763 ATP5BP06576 529 aaKnown RBP12.84□□□□□ -0.35
SMAD3-207ENST00000558763 SERPINA6P08185 405 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 C1SP09871 688 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 CHRM1P11229 460 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-207ENST00000558763 SRFP11831 508 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 POLR2EP19388 210 aaKnown RBP12.84□□□□□ -0.35
SMAD3-207ENST00000558763 CLCN7P51798 805 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 PTSQ03393 145 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 PDAP1Q13442 181 aaKnown RBP12.84□□□□□ -0.35
SMAD3-207ENST00000558763 LRRC73Q5JTD7 316 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 TXNDC11Q6PKC3 985 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms