RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 TTC1Q99614 292 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 TRMT61BQ9BVS5 477 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 SPATA9Q9BWV2 254 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 SORBS1Q9BX66 1292 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 ACPTQ9BZG2 426 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 FAM129AQ9BZQ8 928 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 CEP44Q9C0F1 390 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 EPB41L4BQ9H329 900 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 USP29Q9HBJ7 922 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 TMBIM4Q9HC24 238 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 ETNK2Q9NVF9 386 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 SAE1Q9UBE0 346 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 VANGL2Q9ULK5 521 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 TMED5Q9Y3A6 229 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 ARHGAP10A1A4S6 786 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 C5orf60A6NFR6 353 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 FAM187AA6NFU0 413 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 GOLGA6L10A6NI86 522 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 SHISA7A6NL88 538 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 EBAG9O00559 213 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PCDHGA12O60330 932 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 TBL1XO60907 577 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 GCATO75600 419 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PIAS2O75928 621 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 MOCS2O96007 188 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 HNRNPLP14866 589 aaKnown RBP eCLIP4.08□□□□□ -1.762e-7■■□□□ 13.3
ZEB1-212ENST00000558655 ETS1P14921 441 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PECAM1P16284 738 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 COILP38432 576 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 MDH1P40925 334 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PIK3CBP42338 1070 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 RECQLP46063 649 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 AFF3P51826 1226 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 RPS24P62847 133 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 OTUD4Q01804 1114 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 ZNF177Q13360 481 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 DHX34Q14147 1143 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 P3H1Q32P28 736 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 HSF5Q4G112 596 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PPP6R3Q5H9R7 873 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 LY6G5CQ5SRR4 150 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 RFWD3Q6PCD5 774 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 CCDC137Q6PK04 289 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 IL27RAQ6UWB1 636 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 TMEM25Q86YD3 366 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 ALLCQ8N6M5 410 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 TMCO5AQ8N6Q1 288 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 EIF1ADQ8N9N8 165 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 GLIS1Q8NBF1 620 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 RFWD2Q8NHY2 731 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 CCDC26Q8TAB7 109 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 ACTL9Q8TC94 416 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 ACMSDQ8TDX5 336 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 ACDQ96AP0 544 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 NRBF2Q96F24 287 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 LOXL4Q96JB6 756 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 CMTM3Q96MX0 182 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 TTC25Q96NG3 672 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 RPRD1AQ96P16 312 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 XPO6Q96QU8 1125 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 KXD1Q9BQD3 176 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 UQCC2Q9BRT2 126 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 FEM1AQ9BSK4 669 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 CALN1Q9BXU9 219 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 SLC39A8Q9C0K1 460 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 LINC00597Q9H2U6 94 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 GRHL1Q9NZI5 618 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 COX16Q9P0S2 106 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PCOLCE2Q9UKZ9 415 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 HS3ST2Q9Y278 367 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PCDHGA9Q9Y5G4 932 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PCDHGA8Q9Y5G5 932 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PCDHGA7Q9Y5G6 932 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PCDHGA6Q9Y5G7 932 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PCDHGA3Q9Y5H0 932 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 WNT6Q9Y6F9 365 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 CAPN7Q9Y6W3 813 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 USP24Q9UPU5 2620 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 LRRK1Q38SD2 2015 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 A0A087X0M5 115 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 A0A1B0GX30 115 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 DCDC2BA2VCK2 349 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 MATN3O15232 486 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 FMO6PO60774 539 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 RAMP2O60895 175 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 RHOCP08134 193 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 RPSAP08865 295 aaKnown RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 TYRP14679 529 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 ARSAP15289 507 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PORP16435 677 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-212ENST00000558655 CES1P23141 567 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 TNFSF4P23510 183 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 TNFRSF8P28908 595 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 GDI1P31150 447 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 GJA4P35212 333 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 DIO1P49895 249 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 CORO7P57737 925 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 PRKCQQ04759 706 aa4.08□□□□□ -1.76
ZEB1-212ENST00000558655 LMAN2Q12907 356 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms