RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ITGALP20701 1170 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 PSMA3P25788 255 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 POLD2P49005 469 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 ARRB1P49407 418 aaPredicted RBP17.29■□□□□ 0.36
TPM1-214ENST00000558544 CCT8P50990 548 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 SRP54P61011 504 aaKnown RBP17.29■□□□□ 0.36
TPM1-214ENST00000558544 GUCY2DQ02846 1103 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 ACVR1Q04771 509 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 NFATC2Q13469 925 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 SHBQ15464 509 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 ALG11Q2TAA5 492 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 BBS9Q3SYG4 887 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 DNAJC21Q5F1R6 531 aaKnown RBP17.29■□□□□ 0.36
TPM1-214ENST00000558544 ZRANB3Q5FWF4 1079 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 RD3Q7Z3Z2 195 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 HID1Q8IV36 788 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 PHACTR4Q8IZ21 702 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 RBFAQ8N0V3 343 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 GDAP1Q8TB36 358 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 HDAC10Q969S8 669 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 MFSD3Q96ES6 412 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 SIGLEC10Q96LC7 697 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 TCEAL2Q9H3H9 227 aaPredicted RBP17.29■□□□□ 0.36
TPM1-214ENST00000558544 TREX1Q9NSU2 369 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 DMGDHQ9UI17 866 aaKnown RBP17.29■□□□□ 0.36
TPM1-214ENST00000558544 MAD1L1Q9Y6D9 718 aa17.29■□□□□ 0.36
TPM1-214ENST00000558544 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 PRSS38A1L453 326 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 SCAMP1O15126 338 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 MTX2O75431 263 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 GOT2P00505 430 aaKnown RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 CSF2P04141 144 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 CEACAM5P06731 702 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 NME1P15531 152 aaKnown RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 JUNDP17535 347 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 ARL4CP56559 192 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 PRAMEP78395 509 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 PPARDQ03181 441 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 HIF1AQ16665 826 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 KHDC1Q4VXA5 237 aaKnown RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 MARK2Q7KZI7 788 aaKnown RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 SNX20Q7Z614 316 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 PDIK1LQ8N165 341 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 ZNF669Q96BR6 464 aaPredicted RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 CYP4F12Q9HCS2 524 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 TM7SF3Q9NS93 570 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 DNAAF2Q9NVR5 837 aaKnown RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 SMOXQ9NWM0 555 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 APOBEC3BQ9UH17 382 aaKnown RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 CRLS1Q9UJA2 301 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 SLC17A4Q9Y2C5 497 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 CFAP54Q96N23 3096 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 C4orf47A7E2U8 309 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 H3BM21 787 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 DFNA5O60443 496 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 RASGRP1O95267 797 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 EPHA8P29322 1005 aaPredicted RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 RXRGP48443 463 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 CDKN1CP49918 316 aaPredicted RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 HK3P52790 923 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 PLTPP55058 493 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 CACNG1Q06432 222 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 BNIP3Q12983 259 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 TCEA2Q15560 299 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 SMAD1Q15797 465 aaKnown RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 UAP1L1Q3KQV9 507 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 GLE1Q53GS7 698 aaKnown RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 GPRC6AQ5T6X5 926 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 PSAPL1Q6NUJ1 521 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 AFTPHQ6ULP2 937 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 OR6P1Q8NGX9 317 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 SEC14L1Q92503 715 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 ART4Q93070 314 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 ULK4Q96C45 1275 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 STAMBPL1Q96FJ0 436 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 OR2AG1Q9H205 316 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 CARS2Q9HA77 564 aaKnown RBP17.28■□□□□ 0.36
TPM1-214ENST00000558544 EPB41L5Q9HCM4 733 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 ATXN10Q9UBB4 475 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 SUFUQ9UMX1 484 aa17.28■□□□□ 0.36
TPM1-214ENST00000558544 PTPRZ1P23471 2315 aaPredicted RBP17.27■□□□□ 0.36
TPM1-214ENST00000558544 FAM237BA0A1B0GVD1 139 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 MAGEB16A2A368 324 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 TNFRSF10CO14798 259 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 YKT6O15498 198 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 TNFP01375 233 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 FUCA1P04066 466 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 FOXN2P32314 431 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 GNPDA1P46926 289 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 BLKP51451 505 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 HNRNPKP61978 463 aaKnown RBP eCLIP17.27■□□□□ 0.35
TPM1-214ENST00000558544 HP1BP3Q5SSJ5 553 aaPredicted RBP17.27■□□□□ 0.35
TPM1-214ENST00000558544 LDLRAP1Q5SW96 308 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 STPG1Q5TH74 334 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 ARMC3Q5W041 872 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 ZDHHC24Q6UX98 284 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 TAS2R42Q7RTR8 314 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 ADGRG6Q86SQ4 1221 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 GATAD2AQ86YP4 633 aa17.27■□□□□ 0.35
TPM1-214ENST00000558544 NXPE1Q8N323 547 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms