RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 SFTPCP11686 197 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 PFKFB1P16118 471 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 CHRNA3P32297 505 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 ADCY8P40145 1251 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 ACADSBP45954 432 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 RABIFP47224 123 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 LRBAP50851 2863 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 INHBCP55103 352 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 SPIDRQ14159 915 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 DEFB133Q30KQ1 61 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 EDRF1Q3B7T1 1238 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 CBWD6Q4V339 395 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 TM4SF20Q53R12 229 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 SDK2Q58EX2 2172 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 CBWD3Q5JTY5 395 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 COLEC12Q5KU26 742 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 CBWD5Q5RIA9 395 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 SEL1L3Q68CR1 1132 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 ATL3Q6DD88 541 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 CXorf57Q6NSI4 855 aaKnown RBP6.12□□□□□ -1.43
ZEB1-211ENST00000558440 KYAT3Q6YP21 454 aaKnown RBP6.12□□□□□ -1.43
ZEB1-211ENST00000558440 ERN2Q76MJ5 926 aaKnown RBP6.12□□□□□ -1.43
ZEB1-211ENST00000558440 BEND5Q7L4P6 421 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 CLEC14AQ86T13 490 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 Q8N1X5 172 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 SH2D3CQ8N5H7 860 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 UBR7Q8N806 425 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 EXD3Q8N9H8 876 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 ATP11CQ8NB49 1132 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 TMIEQ8NEW7 156 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 LMX1AQ8TE12 382 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 TFAP2BQ92481 460 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 NAT6Q93015 286 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 SGF29Q96ES7 293 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 PRR11Q96HE9 360 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-211ENST00000558440 PPP1R16AQ96I34 528 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 MAGEB10Q96LZ2 347 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-211ENST00000558440 RPRD1AQ96P16 312 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-211ENST00000558440 SRPK1Q96SB4 655 aaKnown RBP6.12□□□□□ -1.43
ZEB1-211ENST00000558440 FEM1AQ9BSK4 669 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 ZNF747Q9BV97 191 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 VPS11Q9H270 941 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 FAM204AQ9H8W3 233 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 POPDC2Q9HBU9 364 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.12□□□□□ -1.43
ZEB1-211ENST00000558440 COQ6Q9Y2Z9 468 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 COQ4Q9Y3A0 265 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 HS3ST3A1Q9Y663 406 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 CSNK1G3Q9Y6M4 447 aa6.12□□□□□ -1.43
ZEB1-211ENST00000558440 CACNA1DQ01668 2161 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 SYNJ2BP-COX16A0A087WUM0 186 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 SPTY2D1-AS1A0A0U1RR47 76 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 PMS2P1A4D2B8 440 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 TMX2-CTNND1H3BSU7 103 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 SCDO00767 359 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 FPGTO14772 594 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 TPP1O14773 563 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 SLC16A3O15427 465 aaKnown RBP6.11□□□□□ -1.43
ZEB1-211ENST00000558440 CTSLP07711 333 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 MMEP08473 750 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 SRCP12931 536 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 CR2P20023 1033 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 CMA1P23946 247 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 CCR1P32246 355 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 SYKP43405 635 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 RECQLP46063 649 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-211ENST00000558440 RPS21P63220 83 aaKnown RBP6.11□□□□□ -1.43
ZEB1-211ENST00000558440 KRT83P78385 493 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 CDK17Q00537 523 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 SGCGQ13326 291 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 EIF3IQ13347 325 aaKnown RBP6.11□□□□□ -1.43
ZEB1-211ENST00000558440 NFYCQ13952 458 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 PDE1CQ14123 709 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-211ENST00000558440 FZD2Q14332 565 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 DRAP1Q14919 205 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-211ENST00000558440 LINC00303Q3SY05 128 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 ZCWPW2Q504Y3 356 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 SYPL2Q5VXT5 272 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 KANK2Q63ZY3 851 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 KIAA1161Q6NSJ0 714 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 ESRP1Q6NXG1 681 aaKnown RBP6.11□□□□□ -1.43
ZEB1-211ENST00000558440 FBXL22Q6P050 247 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 OVCH1Q7RTY7 1134 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 C14orf80Q86SX3 495 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 PPM1KQ8N3J5 372 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 FBXO39Q8N4B4 442 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 THAP3Q8WTV1 239 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-211ENST00000558440 ASB15Q8WXK1 588 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 EXTL1Q92935 676 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 FEM1CQ96JP0 617 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 NT5C1BQ96P26 610 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 MED15Q96RN5 788 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 TSG101Q99816 390 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 PRMT1Q99873 361 aaKnown RBP6.11□□□□□ -1.43
ZEB1-211ENST00000558440 SLC17A9Q9BYT1 436 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 STRADBQ9C0K7 418 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 CAAP1Q9H8G2 361 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 EPB41L5Q9HCM4 733 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 STARD5Q9NSY2 213 aa6.11□□□□□ -1.43
ZEB1-211ENST00000558440 COX16Q9P0S2 106 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms